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Heme A

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InChI=1/C49H59N4O6.Fe/c1-9-34-31(6)39-25-45-49(46(55)18-12-17-30(5)16-11-15-29(4)14-10-13-28(2)3)33(8)40(52-45)24-44-37(27-54)36(20-22-48(58)59)43(53-44)26-42-35(19-21-47(56)57)32(7)38(51-42)23-41(34)50-39;/h9,13,15,17,23-27,43,46,55H,1,10-12,14,16,18-22H2,2-8H3,(H4-,50,51,52,53,56,57,58,59);/q-1;+2/p-2/b29-15+,30-17+,42-26-;/rC49H57FeN4O6/c1-9-34-31(6)39-25-45-49(46(56)18-12-17-30(5)16-11-15-29(4)14-10-13-28(2)3)33(8)40-24-44-37(27-55)36(20-22-48(59)60)43-26-42-35(19-21-47(57)58)32(7)38-23-41(34)51(39)50(52(38)42,53(40)45)54(43)44/h9,13,15,17,23-27,43,46,56H,1,10-12,14,16,18-22H2,2-8H3,(H,57,58)(H,59,60)/q-1/b29-15+,30-17+
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InChI=1S/C49H59N4O6.Fe/c1-9-34-31(6)39-25-45-49(46(55)18-12-17-30(5)16-11-15-29(4)14-10-13-28(2)3)33(8)40(52-45)24-44-37(27-54)36(20-22-48(58)59)43(53-44)26-42-35(19-21-47(56)57)32(7)38(51-42)23-41(34)50-39;/h9,13,15,17,23-27,43,46,55H,1,10-12,14,16,18-22H2,2-8H3,(H4-,50,51,52,53,56,57,58,59);/q-1;+2/p-2/b29-15+,30-17+,42-26-;
529:. CCO is thought to be responsible for conserving the energy of dioxygen reduction by pumping protons into the inter-membrane mitochondrial space. Both the formyl and hydroxyethylfarnesyl groups of heme A are thought to play important roles in this critical process, as published by the influential group of S. Yoshikawa. 106: 616:
Battersby, Alan R.; McDonald, Edward; Thompson, Mervyn; Chaudhry, Irshad A.; Clezy, Peter S.; Fookes, Christopher J. R.; Hai, Ton That (1985). "Isolation, crystallisation, and synthesis of the dimethyl ester of porphyrin a, the iron-free prosthetic group of cytochrome c oxidase".
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group at position 8, still containing the methyl group. The correct structure of heme A, based upon NMR and IR experiments of the reduced, Fe(II) form of the heme, was published in 1975. The structure was confirmed by synthesis of the dimethyl ester of the iron-free form.
514:). In addition, this enzyme binds 3 copper, magnesium, zinc, and several potassium and sodium ions. The two heme A groups in CCO are thought to readily exchange electrons between each other, the copper ions and the closely associated protein cytochrome c. 462:
The final structural question of the exact geometric configuration about the first carbon at ring position 3 of ring I, the carbon bound to the hydroxyl group, has been shown to be the chiral S configuration.
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An example of a metalloprotein that contains heme A is cytochrome c oxidase. This very complicated protein contains heme A at two different sites, each with a different function. The iron of the heme A of
679:"Absolute configuration of the hydroxyfarnesylethyl group of heme A, determined by X-ray structural analysis of bovine heart cytochrome c oxidase using methods applicable at 2.8 Angstrom resolution" 487: 466:
Like heme B, heme A is often attached to the apoprotein through a coordinate bond between the heme iron and a conserved amino acid side-chain. In the important respiratory protein
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Yoshikawa, S.; Shinzawa-Itoh, K.; Nakashima, R.; et al. (1998). "Redox-Coupled Crystal Structural Changes in Bovine Heart Cytochrome c Oxidase".
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and is produced naturally by many organisms. Heme A, often appears a dichroic green/red when in solution, is a structural relative of
642: 470:(CCO) this ligand 5 for the heme A at the oxygen reaction center is a histidyl group. Histidine is a common ligand for many 256:
OC(=O)CC/c6c(\C)c3n7c6cc2c(/CCC(O)=O)c(/C=O)c1cc5n8c(cc4n(78n12)c(c=3)c(C=C)c4c)c(\C(O)CC\C=C(/C)CC\C=C(/C)CC\C=C(C)/C)c5\C
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side chain are thought to play important roles in conservation of the energy of oxygen reduction by
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is sometimes bound by 5 other atoms leaving the sixth site available to bind dioxygen (molecular
722:"The low-spin heme of cytochrome c oxidase as the driving element of the proton-pumping process" 1308: 1101: 943: 126: 1313: 1111: 1106: 953: 447: 1019: 844: 735: 552: 548: 526: 467: 363: 82: 8: 1193: 999: 72: 848: 739: 572: 198: 1215: 867: 830: 811: 758: 721: 593: 574: 433:, in that both have this farnesyl addition at position 2 but heme O does not have the 1286: 1045: 1027: 872: 803: 786: 763: 702: 659: 598: 815: 165: 862: 852: 795: 753: 743: 692: 651: 622: 588: 271: 799: 1049: 506:
is hexacoordinated, that is bound with 6 other atoms. The iron of the heme A of
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Caughey, W.S.; Smythe, G.A.; O'Keefe, D.H.; Maskasky, J.E.; Smith, M.L. (1975).
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in 1951 and shown by him to be the active component of the integral membrane
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Heme A in the cytochrome a portion of cytochrome c oxidase, bound by two
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Except where otherwise noted, data are given for materials in their
886: 522: 418: 105: 1279: 1223: 935: 831:"The proton pumping pathway of bovine heart cytochrome c oxidase" 828: 719: 615: 152: 1253: 1228: 1162: 1158: 1154: 1009: 917: 518: 511: 434: 430: 410: 403: 399: 383: 95: 640:
Warburg, O; Gewitz H S. (1951). "Cytohämin aus Herzmuskel".
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Tsukihara T, Shimokata K, Katayama Y, et al. (2003).
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Shimokata K, Katayama Y, Murayama H, et al. (2007).
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side chain at ring position 2 of the iron tetrapyrrole
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Journal of the Chemical Society, Perkin Transactions 1
639: 446:Heme A was first isolated by the German biochemist 677:Yamashita E, Aoyama H, Yao M, et al. (2005). 1300: 779: 777: 164: 81: 393: 902: 774: 909: 895: 197: 125: 866: 856: 757: 747: 696: 592: 193: 142: 1301: 60:Iron cytoporphyrin IX, formilporphyrin 890: 643:Zeitschrift für Physiologische Chemie 225:Key: RRRJRRNGYOECDS-ZHOBENDVSA-L 916: 409:at ring position 8 is oxidized to a 235:Key: RRRJRRNGYOECDS-DRKRPJRXBB 155: 13: 457: 38: 29: 14: 1325: 575:"Heme A of Cytochrome c Oxidase" 486: 421:chain, has been attached to the 317: 580:Journal of Biological Chemistry 313:(at 25 °C , 100 kPa). 822: 713: 670: 633: 609: 566: 1: 800:10.1126/science.280.5370.1723 594:10.1016/S0021-9258(19)40860-0 559: 390:, the red pigment in blood. 7: 532: 394:Relationship to other hemes 25: 10: 1330: 656:10.1515/bchm2.1951.288.1.1 441: 415:hydroxyethylfarnesyl group 378:an iron atom. Heme A is a 1271: 1214: 1092: 934: 927: 698:10.1107/S0907444905023358 498:residues (shown in pink) 307: 264: 244: 209: 65: 57: 52: 24: 684:Acta Crystallographica D 858:10.1073/pnas.0611627104 749:10.1073/pnas.2635097100 429:. Heme A is similar to 454:cytochrome c oxidase. 43: 34: 303:852.837 42: 33: 627:10.1039/P19850000135 553:cellular respiration 549:Cytochrome c oxidase 527:cytochrome c oxidase 468:cytochrome c oxidase 398:Heme A differs from 364:coordination complex 849:2007PNAS..104.4200S 794:(5370): 1723–1729. 740:2003PNAS..10015304T 734:(26): 15304–15309. 21: 340:Infobox references 44: 35: 19: 1296: 1295: 1267: 1266: 843:(10): 4200–4205. 691:(10): 1373–1377. 587:(19): 7602–7622. 386:, a component of 348:Chemical compound 346: 345: 178:CompTox Dashboard 107:Interactive image 48: 47: 16:Chemical compound 1321: 932: 931: 911: 904: 897: 888: 887: 881: 880: 870: 860: 826: 820: 819: 781: 772: 771: 761: 751: 717: 711: 710: 700: 674: 668: 667: 637: 631: 630: 613: 607: 606: 596: 570: 490: 370:ligand called a 366:consisting of a 330: 324: 321: 320: 272:Chemical formula 202: 201: 186: 184: 168: 157: 146: 129: 109: 85: 26: 22: 18: 1329: 1328: 1324: 1323: 1322: 1320: 1319: 1318: 1299: 1298: 1297: 1292: 1263: 1210: 1205: 1197: 1088: 1079: 1071: 1055: 1041: 1031: 1023: 1015: 1005: 995: 985: 963: 949: 923: 915: 885: 884: 827: 823: 782: 775: 718: 714: 675: 671: 638: 634: 614: 610: 571: 567: 562: 551:(Complex IV of 535: 460: 458:Stereochemistry 444: 396: 349: 342: 337: 336: 335:  ?) 326: 322: 318: 314: 292: 288: 284: 280: 274: 260: 257: 252: 251: 240: 237: 236: 233: 227: 226: 223: 217: 216: 205: 187: 180: 171: 158: 132: 112: 99: 88: 75: 61: 17: 12: 11: 5: 1327: 1317: 1316: 1311: 1294: 1293: 1291: 1290: 1275: 1273: 1269: 1268: 1265: 1264: 1262: 1261: 1256: 1251: 1246: 1241: 1236: 1231: 1226: 1220: 1218: 1212: 1211: 1209: 1208: 1203: 1199: 1195: 1191: 1186: 1181: 1176: 1171: 1166: 1144: 1139: 1134: 1129: 1124: 1119: 1114: 1109: 1104: 1098: 1096: 1090: 1089: 1087: 1086: 1081: 1077: 1069: 1063: 1057: 1053: 1043: 1039: 1029: 1021: 1017: 1013: 1007: 1003: 997: 993: 987: 983: 965: 961: 951: 947: 940: 938: 929: 925: 924: 914: 913: 906: 899: 891: 883: 882: 821: 773: 712: 669: 632: 608: 564: 563: 561: 558: 557: 556: 546: 541: 534: 531: 521:group and the 492: 491: 459: 456: 452:metalloprotein 443: 440: 395: 392: 347: 344: 343: 338: 316: 315: 311:standard state 308: 305: 304: 301: 295: 294: 290: 286: 282: 278: 275: 270: 267: 266: 262: 261: 259: 258: 255: 247: 246: 245: 242: 241: 239: 238: 234: 231: 230: 228: 224: 221: 220: 212: 211: 210: 207: 206: 204: 203: 195:DTXSID50897568 190: 188: 176: 173: 172: 170: 169: 161: 159: 151: 148: 147: 140: 134: 133: 131: 130: 122: 120: 114: 113: 111: 110: 102: 100: 93: 90: 89: 87: 86: 78: 76: 71: 68: 67: 63: 62: 59: 55: 54: 50: 49: 46: 45: 36: 15: 9: 6: 4: 3: 2: 1326: 1315: 1312: 1310: 1309:Tetrapyrroles 1307: 1306: 1304: 1289: 1288: 1282: 1281: 1277: 1276: 1274: 1270: 1260: 1257: 1255: 1252: 1250: 1247: 1245: 1242: 1240: 1237: 1235: 1232: 1230: 1227: 1225: 1222: 1221: 1219: 1217: 1213: 1207: 1200: 1198: 1192: 1190: 1187: 1185: 1182: 1180: 1179:Molybdopterin 1177: 1175: 1172: 1170: 1167: 1164: 1160: 1156: 1152: 1148: 1145: 1143: 1140: 1138: 1135: 1133: 1132:Cofactor F430 1130: 1128: 1125: 1123: 1120: 1118: 1115: 1113: 1110: 1108: 1105: 1103: 1100: 1099: 1097: 1095: 1091: 1085: 1084:Coenzyme F420 1082: 1075: 1067: 1066:Phylloquinone 1064: 1061: 1060:Ascorbic acid 1058: 1051: 1047: 1044: 1037: 1033: 1025: 1018: 1011: 1008: 1001: 998: 991: 988: 981: 977: 973: 969: 966: 959: 955: 952: 945: 942: 941: 939: 937: 933: 930: 926: 922: 919: 912: 907: 905: 900: 898: 893: 892: 889: 878: 874: 869: 864: 859: 854: 850: 846: 842: 838: 837: 832: 825: 817: 813: 809: 805: 801: 797: 793: 789: 788: 780: 778: 769: 765: 760: 755: 750: 745: 741: 737: 733: 729: 728: 723: 716: 708: 704: 699: 694: 690: 686: 685: 680: 673: 665: 661: 657: 653: 649: 645: 644: 636: 628: 624: 620: 612: 604: 600: 595: 590: 586: 582: 581: 576: 569: 565: 554: 550: 547: 545: 542: 540: 537: 536: 530: 528: 524: 520: 515: 513: 509: 508:cytochrome a3 505: 499: 497: 489: 485: 484: 483: 481: 477: 473: 469: 464: 455: 453: 449: 439: 436: 432: 428: 424: 420: 416: 412: 408: 405: 401: 391: 389: 385: 381: 377: 373: 369: 365: 361: 357: 353: 341: 334: 329: 312: 306: 302: 300: 297: 296: 276: 273: 269: 268: 263: 254: 253: 250: 243: 229: 219: 218: 215: 208: 200: 196: 192: 191: 189: 179: 175: 174: 167: 163: 162: 160: 154: 150: 149: 145: 141: 139: 136: 135: 128: 124: 123: 121: 119: 116: 115: 108: 104: 103: 101: 97: 92: 91: 84: 80: 79: 77: 74: 70: 69: 64: 56: 51: 41: 37: 32: 28: 27: 23: 1314:Biomolecules 1284: 1278: 1184:Mycofactocin 1174:Methanofuran 1150: 1094:non-vitamins 928:Active forms 840: 834: 824: 791: 785: 731: 725: 715: 688: 682: 672: 647: 641: 635: 618: 611: 584: 578: 568: 516: 504:cytochrome a 500: 493: 472:hemeproteins 465: 461: 448:Otto Warburg 445: 413:group and a 397: 355: 351: 350: 66:Identifiers 58:Other names 1169:Lipoic Acid 1147:Heme / Haem 1074:Menaquinone 544:Hemoprotein 380:biomolecule 368:macrocyclic 265:Properties 1303:Categories 1272:Base forms 1216:metal ions 1142:Coenzyme Q 1137:Coenzyme M 1127:Coenzyme B 990:Coenzyme A 944:TPP / ThDP 650:(1): 1–4. 560:References 523:isoprenoid 476:hemoglobin 474:including 419:isoprenoid 407:side chain 402:in that a 388:hemoglobin 299:Molar mass 118:ChemSpider 94:3D model ( 83:18535-39-2 73:CAS Number 1202:THMPT / H 1000:PLP / P5P 921:cofactors 517:Both the 496:histidine 480:myoglobin 376:chelating 372:porphyrin 293:Fe 1287:vitamins 1280:vitamins 1194:THB / BH 1028:DHFA / H 1020:THFA / H 936:vitamins 877:17360500 816:37147458 768:14673090 707:16204889 664:14860765 533:See also 127:21106444 868:1820732 845:Bibcode 808:9624044 787:Science 736:Bibcode 621:: 135. 442:History 358:) is a 333:what is 331: ( 166:5288529 153:PubChem 20:Heme A 1234:Fe, Fe 1046:AdoCbl 1010:Biotin 918:Enzyme 875:  865:  814:  806:  766:  759:307562 756:  705:  662:  603:170266 601:  519:formyl 512:oxygen 435:formyl 431:heme o 411:formyl 404:methyl 400:heme B 384:heme B 356:haem A 352:Heme A 328:verify 325:  249:SMILES 144:Heme+a 53:Names 1050:MeCbl 980:NADPH 812:S2CID 423:vinyl 417:, an 214:InChI 96:JSmol 1285:see 1117:PAPS 1112:SAMe 1036:MTHF 976:NADP 972:NADH 873:PMID 836:PNAS 804:PMID 764:PMID 727:PNAS 703:PMID 660:PMID 599:PMID 539:Heme 478:and 427:heme 362:, a 360:heme 354:(or 138:MeSH 1206:MPT 1189:PQQ 1122:GSH 1107:CTP 1102:ATP 1072:), 1062:(C) 968:NAD 958:FAD 954:FMN 863:PMC 853:doi 841:104 796:doi 792:280 754:PMC 744:doi 732:100 693:doi 652:doi 648:288 623:doi 589:doi 585:250 183:EPA 156:CID 1305:: 1283:: 1259:Zn 1254:Ni 1249:Mo 1244:Mn 1239:Mg 1229:Cu 1224:Ca 1161:, 1157:, 1153:, 1076:(K 1068:(K 1054:12 1052:(B 1048:, 1038:(B 1034:, 1032:FA 1026:, 1024:FA 1012:(B 1002:(B 992:(B 982:(B 978:, 974:, 970:, 960:(B 956:, 946:(B 871:. 861:. 851:. 839:. 833:. 810:. 802:. 790:. 776:^ 762:. 752:. 742:. 730:. 724:. 701:. 689:61 687:. 681:. 658:. 646:. 597:. 583:. 577:. 482:. 374:, 283:56 279:49 1204:4 1196:4 1165:) 1163:O 1159:C 1155:B 1151:A 1149:( 1080:) 1078:2 1070:1 1056:) 1042:) 1040:9 1030:2 1022:4 1016:) 1014:7 1006:) 1004:6 996:) 994:5 986:) 984:3 964:) 962:2 950:) 948:1 910:e 903:t 896:v 879:. 855:: 847:: 818:. 798:: 770:. 746:: 738:: 709:. 695:: 666:. 654:: 629:. 625:: 605:. 591:: 555:) 323:Y 291:4 289:N 287:6 285:O 281:H 277:C 185:) 181:( 98:)

Index



CAS Number
18535-39-2
JSmol
Interactive image
ChemSpider
21106444
MeSH
Heme+a
PubChem
5288529
CompTox Dashboard
DTXSID50897568
Edit this at Wikidata
InChI
SMILES
Chemical formula
Molar mass
standard state
verify
what is
Infobox references
heme
coordination complex
macrocyclic
porphyrin
chelating
biomolecule
heme B

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