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X-gal

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278: 189: 581: 394: 24: 793:, β-galactosidase may be used as a reporter to identify proteins that interact with each other. In this method, genome libraries may be screened for protein interaction using yeast or bacterial system. Where there is a successful interaction between proteins being screened, it will result to the binding of an activation domain to a promoter. If the promoter is linked to a 652:-1-thiogalactopyranoside). IPTG is a chemical structure analogue of lactose. However, IPTG cannot be hydrolyzed by β-galactosidase. IPTG is used as an inducer that binds to lac repressor releasing the DNA and allowing transcription. The presence of IPTG in the agar plate therefore increases the synthesis of β-galactosidase. 797:
gene, the production of β-galactosidase, which results in the formation of blue-pigmented colonies in the presence of X-gal, will therefore indicate a successful interaction between proteins. This technique may be limited to screening libraries of size of less than around 10. The successful cleavage
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cells, they form a functional β-galactosidase. The presence of an active β-galactosidase may be detected when cells are grown in plates containing X-gal, the blue-colored product precipitated within cells resulted in the characteristic blue colonies. However, the multiple cloning site, where a gene
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gene, α-complementation is therefore also disrupted and no functional β-galactosidase can form, resulting in white colonies. Cells containing successfully ligated insert can then be easily identified by its white coloration from the unsuccessful blue ones. Example of cloning vectors used for this
556:, an intensely blue product which is insoluble. X-gal itself is colorless, so the presence of blue-colored product may therefore be used as a test for the presence of active β-galactosidase. This also allows for bacterial β-galactosidase (so called 126: 453:
and collaborators in 1964. The formal chemical name is often shortened to less accurate but also less cumbersome phrases such as bromochloroindoxyl galactoside. The X from
504: 927:"Development of a semi-quantitative plate-based alpha-galactosidase gene reporter for Schizosaccharomyces pombe and its use to isolate a constitutively active Mam2" 407: 614:
gene (lacZΔM15) in the cell. Both genes by themselves produce non-functional peptides, however, when expressed together, as when a plasmid containing
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X-gal has a number of variants, which are similar molecules with slight differences serving mainly to produce colors other than blue as a signal.
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InChI=1S/C14H15BrClNO6/c15-5-1-2-6-9(10(5)16)7(3-17-6)22-14-13(21)12(20)11(19)8(4-18)23-14/h1-3,8,11-14,17-21H,4H2/t8-,11+,12+,13-,14-/m1/s1
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InChI=1/C14H15BrClNO6/c15-5-1-2-6-9(10(5)16)7(3-17-6)22-14-13(21)12(20)11(19)8(4-18)23-14/h1-3,8,11-14,17-21H,4H2/t8-,11+,12+,13-,14-/m1/s1
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The blue/white screening method relies on the principle of α-complementation of the β-galactosidase gene, where a fragment of the
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Kiernan JA 2007. Indigogenic substrates for detection and localization of enzymes. Biotechnic & Histochemistry 82(2): 73-103.
603:. This method of screening is a convenient way of distinguishing a successful cloning product from other unsuccessful ones. 909: 829:
Horwitz JP et al., 1964. Substrates for cytochemical demonstration of enzyme activity. I. Some substituted 3-indolyl-β-
292: 1111: 414: 402: 1132: 1090: 1027: 54: 544:-lactose. X-gal, when cleaved by β-galactosidase, yields galactose and 5-bromo-4-chloro-3-hydroxyindole - 235: 184: 465:, in the place of its usual target, a β-galactoside. It is also used to detect activity of this enzyme in 256: 273: 1069: 1048: 473:. X-gal is one of many indoxyl glycosides and esters that yield insoluble blue compounds similar to 202: 1158:"A bacterial two-hybrid selection system for studying protein-DNA and protein-protein interactions" 513: 196: 508:(Xαgal, X-alpha-gal), or 5-Bromo-4-chloro-3-indolyl-α-D-galactopyranoside, which is hydrolyzed by 1230: 1220: 489: 36: 1235: 1169: 244: 166: 876: 852: 548:. The latter then spontaneously dimerizes and is oxidized into 5,5'-dibromo-4,4'-dichloro- 102: 8: 790: 92: 1173: 277: 188: 146: 962: 596: 533: 462: 568: 509: 1197: 1192: 1157: 954: 946: 905: 600: 525: 458: 966: 1225: 1187: 1177: 938: 592: 438: 350: 224: 537: 595:, X-gal is used as a visual indication of whether a cell expresses a functional 466: 450: 385: 1214: 950: 561: 177: 457:
may be the source of the X in the X-gal contraction. X-gal is often used in
1201: 1182: 958: 926: 853:"Information on EC 3.2.1.22 - alpha-galactosidase - BRENDA Enzyme Database" 470: 877:"Information on EC 3.2.1.23 - beta-galactosidase - BRENDA Enzyme Database" 798:
of X-gal also creates a noticeably foul odor due to the volatilization of
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of interest may be ligated into the plasmid vector, is located within the
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gene. Often, the plate containing X-Gal also contains IPTG (isopropyl β-
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Except where otherwise noted, data are given for materials in their
1005:"Blue/White Cloning of a DNA Fragment and Assay of β-Galactosidase" 125: 580: 529: 454: 211: 811: 799: 446: 833:-glycopyranosides. Journal of Medicinal Chemistry 7: 574-575. 633: 137: 115: 261: 640:, pGem-T Vectors, and it also requires the use of specific 611: 607: 610:
gene (lacZα) in the plasmid can complement another mutant
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Goddard, Alan; Ladds, Graham; Davey, John (2005-01-15).
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host strains such as DH5α which carries the mutant
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Similarly, Xαgal is used as a reporter compound for
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3.2.1.22) instead of β-galactosidase (EC 3.2.1.23).
904:. I K International Publishing House. p. 116. 498: 924: 627:gene. Successful ligation therefore disrupts the 1212: 1091:"5-Bromo-6-chloro-3-indolyl-β-D-glucopyranoside" 223: 784: 101: 1155: 1133:"4-Methylumbelliferyl β-D-galactopyranoside" 477:as a result of enzyme-catalyzed hydrolysis. 726:Magenta glucoside, Magenta-GLC, Magenta gal 276: 187: 165: 1191: 1181: 1028:"5-Bromo-3-indolyl β-D-galactopyranoside" 532:, and therefore may be hydrolyzed by the 243: 1151: 1149: 461:to test for the presence of an enzyme, 272: 201: 79:)-2--6-(hydroxymethyl)oxane-3,4,5-triol 1213: 899: 178: 1146: 304:Key: OPIFSICVWOWJMJ-AEOCFKNESA-N 145: 692:Rose-Gal, Salmon-Gal, Y-Gal, Red-Gal 480:A less often used but very similar ( 335:Brc3ccc2c(c(O1O((O)(O)1O)CO)c2)c3Cl 314:Key: OPIFSICVWOWJMJ-AEOCFKNEBZ 214: 13: 449:. The compound was synthesized by 14: 1247: 433:for 5-bromo-4-chloro-3-indolyl-β- 1156:Joung J, Ramm E, Pabo C (2000). 579: 392: 22: 1125: 1104: 1083: 1062: 1041: 388:(at 25 °C , 100 kPa). 1112:"Green-β-D-Gal - Biotium, Inc" 1020: 997: 973: 918: 893: 869: 845: 836: 823: 1: 1070:"Purple-beta-D-Gal - PubChem" 900:Sandhu, Sardul Singh (2010). 817: 729:5-Bromo-6-chloro-3-indolyl-β- 599:enzyme in a technique called 785:Protein-protein interactions 7: 931:Yeast (Chichester, England) 805: 655: 574: 536:enzyme which cleaves the β- 10: 1252: 902:Recombinant DNA Technology 586: 437:-galactopyranoside) is an 564:in various applications. 382: 343: 323: 288: 85: 53: 35: 30: 21: 445:linked to a substituted 763:4-Methylumbelliferyl β- 519: 499:{\displaystyle \alpha } 1183:10.1073/pnas.110149297 1162:Proc Natl Acad Sci USA 1049:"Salmon-Gal - PubChem" 881:www.brenda-enzymes.org 857:www.brenda-enzymes.org 618:is transformed into a 571:(e.g. Mel1 in yeast). 500: 695:6-Chloro-3-indolyl-β- 501: 378:408.629 55:Systematic IUPAC name 680:5-Bromo-3-indolyl β- 601:blue/white screening 490: 1174:2000PNAS...97.7382J 791:two-hybrid analysis 714:5-Iodo-3-indolyl-β- 18: 767:-galactopyranoside 752:-galactopyranoside 748:N-Methylindolyl-β- 718:-galactopyranoside 699:-galactopyranoside 684:-galactopyranoside 677:Blue-Gal, Bluo-Gal 560:) to be used as a 496: 429:(also abbreviated 415:Infobox references 48:-galactopyranoside 40:5-Bromo-4-chloro-1 16: 782: 781: 459:molecular biology 423:Chemical compound 421: 420: 257:CompTox Dashboard 127:Interactive image 1243: 1206: 1205: 1195: 1185: 1153: 1144: 1143: 1141: 1139: 1129: 1123: 1122: 1120: 1118: 1108: 1102: 1101: 1099: 1097: 1087: 1081: 1080: 1078: 1076: 1066: 1060: 1059: 1057: 1055: 1045: 1039: 1038: 1036: 1034: 1024: 1018: 1017: 1015: 1014: 1009: 1001: 995: 994: 992: 991: 981:"IPTG - Bioline" 977: 971: 970: 943:10.1002/yea.1190 922: 916: 915: 897: 891: 890: 888: 887: 873: 867: 866: 864: 863: 849: 843: 840: 834: 832: 827: 766: 751: 744: 733:-glucopyranoside 732: 717: 710: 698: 683: 663: 662: 651: 583: 543: 505: 503: 502: 497: 439:organic compound 436: 405: 399: 396: 395: 351:Chemical formula 281: 280: 265: 263: 247: 227: 216: 205: 191: 180: 169: 149: 129: 105: 47: 26: 19: 15: 1251: 1250: 1246: 1245: 1244: 1242: 1241: 1240: 1211: 1210: 1209: 1154: 1147: 1137: 1135: 1131: 1130: 1126: 1116: 1114: 1110: 1109: 1105: 1095: 1093: 1089: 1088: 1084: 1074: 1072: 1068: 1067: 1063: 1053: 1051: 1047: 1046: 1042: 1032: 1030: 1026: 1025: 1021: 1012: 1010: 1007: 1003: 1002: 998: 989: 987: 985:www.bioline.com 979: 978: 974: 923: 919: 912: 898: 894: 885: 883: 875: 874: 870: 861: 859: 851: 850: 846: 841: 837: 830: 828: 824: 820: 808: 787: 777: 773: 764: 749: 742: 730: 715: 708: 696: 681: 658: 649: 597:β-galactosidase 589: 577: 569:α-galactosidase 541: 538:glycosidic bond 534:β-galactosidase 522: 510:α-galactosidase 491: 488: 487: 463:β-galactosidase 434: 424: 417: 412: 411: 410:  ?) 401: 397: 393: 389: 367: 363: 359: 353: 339: 336: 331: 330: 319: 316: 315: 312: 306: 305: 302: 296: 295: 284: 274:DTXSID901349452 266: 259: 250: 230: 217: 172: 152: 132: 119: 108: 95: 81: 80: 49: 45: 12: 11: 5: 1249: 1239: 1238: 1233: 1228: 1223: 1208: 1207: 1168:(13): 7382–7. 1145: 1124: 1103: 1082: 1061: 1040: 1019: 996: 972: 917: 911:978-9380578446 910: 892: 868: 844: 835: 821: 819: 816: 815: 814: 807: 804: 786: 783: 780: 779: 775: 771: 770:Fluorescent (λ 768: 761: 757: 756: 753: 746: 738: 737: 734: 727: 723: 722: 719: 712: 704: 703: 700: 693: 689: 688: 685: 678: 674: 673: 670: 667: 657: 654: 588: 585: 576: 573: 521: 518: 495: 484:) compound is 467:histochemistry 451:Jerome Horwitz 441:consisting of 422: 419: 418: 413: 391: 390: 386:standard state 383: 380: 379: 376: 370: 369: 365: 361: 357: 354: 349: 346: 345: 341: 340: 338: 337: 334: 326: 325: 324: 321: 320: 318: 317: 313: 310: 309: 307: 303: 300: 299: 291: 290: 289: 286: 285: 283: 282: 269: 267: 255: 252: 251: 249: 248: 240: 238: 232: 231: 229: 228: 220: 218: 210: 207: 206: 199: 193: 192: 182: 174: 173: 171: 170: 162: 160: 154: 153: 151: 150: 142: 140: 134: 133: 131: 130: 122: 120: 113: 110: 109: 107: 106: 98: 96: 91: 88: 87: 83: 82: 58: 57: 51: 50: 44:-indol-3-yl β- 39: 33: 32: 28: 27: 9: 6: 4: 3: 2: 1248: 1237: 1234: 1232: 1229: 1227: 1224: 1222: 1219: 1218: 1216: 1203: 1199: 1194: 1189: 1184: 1179: 1175: 1171: 1167: 1163: 1159: 1152: 1150: 1134: 1128: 1113: 1107: 1092: 1086: 1071: 1065: 1050: 1044: 1029: 1023: 1006: 1000: 986: 982: 976: 968: 964: 960: 956: 952: 948: 944: 940: 936: 932: 928: 921: 913: 907: 903: 896: 882: 878: 872: 858: 854: 848: 839: 826: 822: 813: 810: 809: 803: 801: 796: 792: 769: 762: 759: 758: 754: 747: 740: 739: 735: 728: 725: 724: 720: 713: 706: 705: 701: 694: 691: 690: 686: 679: 676: 675: 671: 668: 665: 664: 661: 653: 647: 643: 639: 635: 630: 626: 621: 617: 613: 609: 604: 602: 598: 594: 584: 582: 572: 570: 565: 563: 559: 555: 551: 547: 539: 535: 531: 527: 517: 515: 511: 507: 493: 483: 478: 476: 472: 468: 464: 460: 456: 452: 448: 444: 440: 432: 428: 416: 409: 404: 387: 381: 377: 375: 372: 371: 355: 352: 348: 347: 342: 333: 332: 329: 322: 308: 298: 297: 294: 287: 279: 275: 271: 270: 268: 258: 254: 253: 246: 242: 241: 239: 237: 234: 233: 226: 222: 221: 219: 213: 209: 208: 204: 200: 198: 195: 194: 190: 186: 183: 181: 179:ECHA InfoCard 176: 175: 168: 164: 163: 161: 159: 156: 155: 148: 144: 143: 141: 139: 136: 135: 128: 124: 123: 121: 117: 112: 111: 104: 100: 99: 97: 94: 90: 89: 84: 78: 74: 70: 66: 62: 56: 52: 43: 38: 34: 29: 25: 20: 1231:Chloroarenes 1221:Galactosides 1165: 1161: 1136:. Retrieved 1127: 1115:. Retrieved 1106: 1094:. Retrieved 1085: 1073:. Retrieved 1064: 1052:. Retrieved 1043: 1031:. Retrieved 1022: 1011:. Retrieved 999: 988:. Retrieved 984: 975: 937:(1): 31–41. 934: 930: 920: 901: 895: 884:. Retrieved 880: 871: 860:. Retrieved 856: 847: 838: 825: 794: 788: 659: 645: 641: 628: 624: 619: 615: 605: 593:gene cloning 590: 578: 566: 557: 553: 545: 524:X-gal is an 523: 485: 479: 471:bacteriology 430: 426: 425: 86:Identifiers 76: 72: 68: 64: 60: 41: 1236:Bromoarenes 638:pBluescript 344:Properties 185:100.027.855 147:CHEBI:75055 1215:Categories 1138:4 February 1117:4 February 1096:4 February 1075:4 February 1054:4 February 1033:4 February 1013:2023-09-10 990:2018-05-15 886:2023-07-31 862:2023-07-31 818:References 687:Dark blue 666:Short name 475:indigo dye 374:Molar mass 245:V595OG374W 158:ChemSpider 114:3D model ( 93:CAS Number 37:IUPAC name 951:0749-503X 760:MUG, MUGA 707:Purple-β- 669:Long name 632:test are 494:α 443:galactose 103:7240-90-6 1202:10852947 967:33926866 959:15580593 806:See also 774:= 365, λ 741:Green-β- 736:Magenta 656:Variants 646:lacZΔM15 620:lacZΔM15 575:Reaction 562:reporter 1226:Indoles 1170:Bibcode 778:= 455) 721:Purple 642:E. coli 587:Cloning 530:lactose 455:indoxyl 408:what is 406: ( 368: 212:PubChem 1200:  1190:  965:  957:  949:  908:  812:X-Gluc 800:indole 755:Green 672:Color 550:indigo 526:analog 482:chiral 447:indole 403:verify 400:  364:BrClNO 328:SMILES 31:Names 17:X-gal 1193:16554 1008:(PDF) 963:S2CID 702:Pink 634:pUC19 629:lacZα 625:lacZα 616:lacZα 558:lacZ 427:X-gal 293:InChI 225:65181 203:X-gal 167:58680 138:ChEBI 116:JSmol 1198:PMID 1140:2014 1119:2014 1098:2014 1077:2014 1056:2014 1035:2014 955:PMID 947:ISSN 906:ISBN 795:lacZ 745:-Gal 711:-Gal 612:lacZ 608:lacZ 520:Uses 506:-gal 469:and 431:BCIG 236:UNII 197:MeSH 1188:PMC 1178:doi 939:doi 789:In 591:In 540:in 528:of 262:EPA 215:CID 1217:: 1196:. 1186:. 1176:. 1166:97 1164:. 1160:. 1148:^ 983:. 961:. 953:. 945:. 935:22 933:. 929:. 879:. 855:. 802:. 776:em 772:ex 636:, 552:- 514:EC 486:X- 362:15 358:14 75:,6 71:,5 67:,4 63:,3 59:(2 1204:. 1180:: 1172:: 1142:. 1121:. 1100:. 1079:. 1058:. 1037:. 1016:. 993:. 969:. 941:: 914:. 889:. 865:. 831:D 765:D 750:D 743:D 731:D 716:D 709:D 697:D 682:D 650:D 554:2 546:1 542:D 512:( 435:D 398:N 366:6 360:H 356:C 264:) 260:( 118:) 77:R 73:R 69:S 65:R 61:S 46:D 42:H

Index


IUPAC name
Systematic IUPAC name
CAS Number
7240-90-6
JSmol
Interactive image
ChEBI
CHEBI:75055
ChemSpider
58680
ECHA InfoCard
100.027.855
Edit this at Wikidata
MeSH
X-gal
PubChem
65181
UNII
V595OG374W
CompTox Dashboard
DTXSID901349452
Edit this at Wikidata
InChI
SMILES
Chemical formula
Molar mass
standard state
verify
what is

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