Knowledge

Olduvai domain

Source 📝

623:
genetic elements, are highly susceptible to increases and decreases in number of copies, through duplications or deletions, and the researchers referenced various studies from 2005 to 2009 that found that a higher number of copies contributed to autism severity while a lower number contributed to schizophrenia severity. Since these disorders are fairly common among humans, it was proposed that this explained their prevalence. This model was elaborated on in more detail in a 2018 article that included one of the original authors, in light of new evidence in the intervening years.
294:(~35), single- or low-copy in non-primate mammals and absent in non-mammals. Consequently, the Olduvai domain demonstrates the largest HLS increase in copy number of any protein-coding region over any other living species, an additional ~160 copies compared with chimpanzees. The increase in the number of copies that are present in connection with Olduvai seems to have a direct correlation with several phenotypes of the brain including the increase in brain size as seen through evolution. 440:. There was no significant association found in females. Additionally, it was found that males with higher CON2 numbers appeared to have the largest increases in IQ over other males of the same age at a mean age of 11 years old. The correlation then appeared to decrease with age. A proportional advantage was also present in younger individuals. This corroborated studies that have shown that brain growth in the brightest children, and children with 345:
associated with increasing severity of social impairment in autism. This evidence is relevant for current theories proposing that autism and psychosis are fundamentally related. The precise nature of this relationship is currently under debate, with alternative lines of argument suggesting that the two are diametrically opposed diseases, exist on a continuum or exhibit a more nuanced relationship.
444:, increases after birth and peaks at around age 11 or 12 before slowing down in adulthood. In the second group, birth head circumference was not found to significantly affect IQ, further corroborating these studies. The second cohort had previously had a genetic analysis rule out any effect on IQ of other genome-wide 415:
association with IQ, however, was through its effects on bilateral temporal surface area. Notably, this contribution to IQ was larger than that of its effects on right frontal lobe surface area, despite the fact that it increased this area the most. It was concluded that the Olduvai domain appears to have a role in
532:, around 450 million years ago, however, the Olduvai domain is not clearly seen until the emergence of mammals. The first Olduvai domain located outside of myomegalin is seen approximately 100–150 million years ago, when the domain was included in a duplication and transposition event which created a new gene, 634:
inverts) that occurred between 1p11.2 and 1q21.2 in the human lineage after the separation from chimpanzees. This was theorised to have contributed to their hyper-amplification specifically in humans, because pairs of chromosomes in which one contains a pericentric inversion and the other does not (a
622:
In 2009, it was proposed that the larger brain size conferred by a high number of Olduvai domain copies in humans carried an evolutionary advantage which led to the persistence and maintenance of Olduvai copies within this high range. At the same time, the Olduvai domains, like many other repetitive
451:
This association has important implications for understanding the interplay between cognitive function and autism phenotypes. These findings also provide additional support for the involvement of Olduvai in a genomic trade-off model involving the human brain: the same key genes that have been major
379:
IQ test and the Progressive Achievement Mathematics test. The strength of the association between CON2 and IQ was reported to be greater than that of any other single genetic candidate reported in any previous study. This effect was significantly more profound in males. The CON2 copy number of most
344:
DUF1220 copy number variation have recently been investigated in autism which is a disorder associated with deletions and duplications of 1q21 yet the causative loci within such regions have not previously been identified. Such research has found that copy number of DUF1220 subtype CON1 is linearly
595:
genes primarily involving a sequential series of three variants of the domain. These three variants were also found in gorilla and chimpanzee genomes but are not repeated in triplet form and are only present in around five copies overall. Based on this, the variants were given the names HLS1, HLS2
366:
investigation of the potential association between DUF1220 and brain size found that DUF1220 copy number decrease is associated with microcephaly in individuals with 1q21 CNVs. Of all 1q21 sequences tested, DUF1220 sequences were the only ones to show consistent correlation between copy number and
414:
increase in IQ, with left temporal surface area being slightly more important. However, it was found that CON2's effects on IQ remained substantial even after eliminating bilateral temporal surface area, right frontal lobe surface area and total grey matter volume as factors. A portion of CON2's
305:
in length and are encoded by a two-exon doublet. Sequences encoding DUF1220 domains show rhythmicity, resonance and signs of positive selection, especially in primates, and are expressed in several human tissues including brain, where their expression is restricted to neurons. The various HLS
374:
and mathematical aptitude scores, a finding replicated in two independent groups from different countries. The study specifically studied the Olduvai variants CON1 and CON2, noting that measurement of the very high copy number HLS1–3 variants had been challenging given technologies currently
464:
Olduvai domains are one of the many genetic elements located in the 1q21.1 region, which has a high number of repeated elements and therefore a high tendency towards deletions and duplications. This has led to several conditions that involve this region being identified, including
432:
cell divisions, corroborated by higher neuron numbers in primates being associated with Olduvai copy number. Additionally, studies have shown that cerebral size in primates is almost exclusively correlated with a linear addition of neurons, rather than neuronal size or density.
828:
reported by G. Laureys et al. in 1990. The researchers noticed that a novel protein domain that seemed to match the DUF1220 Pfam entry was present in multiple copies in this gene and in several other places on chromosome 1, which led them to establish 22
651:
and duplications are much more propense to occur. This, combined with the fact that higher copies of Olduvai domains may have had an evolutionary advantage, could have resulted in the rapid duplication and persistence of Olduvai domains in humans.
353:
Schizophrenia is a neurological condition in which there are issues in brain development. In contrast with autism, copy number increase of DUF1220 subtypes CON1 and HLS1 is associated with reduced severity of positive symptoms in schizophrenia.
419:
proliferation, since this proliferation seems to be the major contributor to lobe surface area while also explaining the effects of Olduvai dosage that could not be explained by brain region measurements. Corroborating this are stem cell
380:
of the males ranged from 26 to 33, with a mean of 29, and each additional copy was associated with an average IQ score increase of 3.3. CON1 number, on the other hand, was not found to have a significant association with IQ scores.
367:
brain size in both disease (micro/macrocephaly) and non-disease populations. In addition, in primates there is a significant correlation between DUF1220 copy number and both brain size and brain cortical neuron number.
330:
of neurons. When Olduvai copy number is reduced, neurons appear to mature faster and divide less. Conversely, when Olduvai copy number is increased, neurons appear to mature for longer and divide in higher numbers.
626:
In 2012, a genetic explanation for the high instability and persistence of the Olduvai-containing regions was put forward: it was found that the HLS Olduvai domains had been affected by a known
391:
surface area showed the strongest association with both CON1 and CON2 copy number. This association was slightly stronger with CON2 copy number. There were no CON1 or CON2 associations with
928:
Popesco MC, Maclaren EJ, Hopkins J, Dumas L, Cox M, Meltesen L, et al. (September 2006). "Human lineage-specific amplification, selection, and neuronal expression of DUF1220 domains".
480:
Studies of deletions and duplications in the 1q21.1 region have consistently revealed microcephaly in association with deletions and macrocephaly in association with duplications.
452:
contributors to the evolutionary expansion of the human brain and human cognitive capacity may also, in different combinations, underlie psychiatric disorders such as autism and
250:
to reach over 20 genes in humans. In humans, Olduvai domains are repeated often dozens of times within these genes. The only other gene an Olduvai domain has been found in is
779:, which shows different colours where the two strands no longer line up. The study found 134 genes that showed human lineage-specific increases in copy number, one of which, 1296: 133: 604:. Hyper-amplification of the triplet resulted in the addition of ~149 copies of Olduvai specifically to the human lineage since its divergence from the genus 406:
These volume and area increases in the grey matter of all cerebral lobes were found to significantly correlate with higher IQ scores. Notably, bilateral
1365:"DUF1220 copy number is associated with schizophrenia risk and severity: implications for understanding autism and schizophrenia as related diseases" 362:
The dosage of the Olduvai protein domain increases along with brain size, which is seen through the evolution from primates to humans. Targeted 1q21
1627:"Recurrent reciprocal 1q21.1 deletions and duplications associated with microcephaly or macrocephaly and developmental and behavioral abnormalities" 2073: 1475:"DUF1220 copy number is linearly associated with increased cognitive function as measured by total IQ and mathematical aptitude scores" 383:
Brain region associations were also studied. CON1 and CON2 copy number were found to raise the volumes and areas of all four bilateral
209:
and appears to be involved in human brain evolution. The protein domain has also been linked to several neurogenetic disorders such as
77: 741: 376: 768: 591:
It was found in 2012 that the exceptional increase in human Olduvai copy number was a result of multiple duplications within the
707:
that appeared in the human genome did not duplicate as a single gene, but rather did so as a two-gene module, composed of one
153: 644: 370:
A 2015 study found that Olduvai copy number is linearly correlated with increased cognitive function, as measured by total
776: 1094:"Solution NMR backbone assignment reveals interaction-free tumbling of human lineage-specific Olduvai protein domains" 810:(neuroblastoma breakpoint family) gene family, which contains all the known Olduvai domains except the one found in 437: 424:
that have also shown Olduvai's proliferative effects neuronal stem cells. However, Olduvai also had effects on
759:
The Olduvai domain was first identified in 2004 in a study of copy number differences between human and great
141: 301:
in region 1q21.1-q21.2, with several copies also found at 1p36, 1p13.3, and 1p12. They are approximately 65
793:
IMAGE:843276), contained six Olduvai domains. The domain remained unnamed as of that time and was given a
798: 474: 1194:"DUF1220 dosage is linearly associated with increasing severity of the three primary symptoms of autism" 82: 1963:"A novel gene family NBPF: intricate structure generated by gene duplications during primate evolution" 1245:"Replicated linear association between DUF1220 copy number and severity of social impairment in autism" 772: 307: 194: 173: 169: 165: 137: 821: 2114: 2077: 1625:
Brunetti-Pierri N, Berg JS, Scaglia F, Belmont J, Bacino CA, Sahoo T, et al. (December 2008).
1415:
Dumas LJ, O'Bleness MS, Davis JM, Dickens CM, Anderson N, Keeney JG, et al. (September 2012).
814:, was independently identified by Vandepoele et al. in 2005 as a result of a gene (which was named 470: 1861:"Paired involvement of human-specific Olduvai domains and NOTCH2NL genes in human brain evolution" 1338: 17: 1473:
Davis JM, Searles VB, Anderson N, Keeney J, Raznahan A, Horwood LJ, et al. (January 2015).
992:
O'Bleness MS, Dickens CM, Dumas LJ, Kehrer-Sawatzki H, Wyckoff GJ, Sikela JM (September 2012).
445: 375:
available. It found that those with a higher number of copies of CON2 had higher scores on the
1810:
Dumas L, Kim YH, Karimpour-Fard A, Cox M, Hopkins J, Pollack JR, Sikela JM (September 2007).
640: 627: 2109: 1143:"The case for DUF1220 domain dosage as a primary contributor to anthropoid brain expansion" 1043:"High resolution measurement of DUF1220 domain copy number from whole genome sequence data" 937: 120: 1092:
Issaian A, Schmitt L, Born A, Nichols PJ, Sikela J, Hansen K, et al. (October 2019).
727:
genes underwent human-specific hyper-amplification, increasing from 13 copies (encoded by
703:
partner. This striking genomic arrangement suggests that each of the additional copies of
8: 648: 1674:
Mefford HC, Sharp AJ, Baker C, Itsara A, Jiang Z, Buysse K, et al. (October 2008).
941: 2060: 2020: 1887: 1860: 1836: 1811: 1752: 1727: 1700: 1675: 1651: 1626: 1602: 1577: 1550: 1523: 1499: 1474: 1441: 1416: 1389: 1364: 1269: 1244: 1220: 1193: 1169: 1142: 1118: 1093: 1069: 1042: 1018: 993: 961: 900: 873: 488:
Genome sequences indicate that the Olduvai protein domain first appears as part of the
384: 1938: 1911: 1910:
Fortna A, Kim Y, MacLaren E, Marshall K, Hahn G, Meltesen L, et al. (July 2004).
1578:"Genomic trade-offs: are autism and schizophrenia the steep price of the human brain?" 686:, none are functional. Immediately adjacent to, and downstream of, each of these four 2052: 2032: 1984: 1943: 1892: 1841: 1812:"Gene copy number variation spanning 60 million years of human and primate evolution" 1792: 1757: 1705: 1656: 1607: 1555: 1504: 1446: 1394: 1319: 1274: 1225: 1174: 1123: 1074: 1023: 953: 905: 323: 291: 235: 160: 128: 2064: 2024: 58: 2044: 2012: 1974: 1933: 1923: 1882: 1872: 1831: 1823: 1784: 1747: 1739: 1695: 1687: 1646: 1638: 1597: 1589: 1545: 1535: 1494: 1486: 1436: 1428: 1417:"DUF1220-domain copy number implicated in human brain-size pathology and evolution" 1384: 1376: 1311: 1264: 1256: 1215: 1205: 1164: 1154: 1113: 1105: 1064: 1054: 1013: 1005: 965: 945: 895: 890: 885: 553: 549: 516:
especially, that lacks Olduvai sequences but, when mutated, has been implicated in
416: 247: 116: 2048: 2095: 1928: 1676:"Recurrent rearrangements of chromosome 1q21.1 and variable pediatric phenotypes" 1210: 425: 70: 723:
partners) went from one gene to four in humans, DUF1220 copies encoded by these
496:) on chromosome 1q36 in mammals at least 200 million years ago. Myomegalin is a 1877: 1432: 1292: 1109: 688: 636: 202: 2007:
Check E (August 2006). "Multiple copies of a mystery gene may make us human".
1788: 1775:
Bond J, Woods CG (February 2006). "Cytoskeletal genes regulating brain size".
1593: 1490: 1315: 1260: 1059: 2103: 1912:"Lineage-specific gene duplication and loss in human and great ape evolution" 1540: 1192:
Davis JM, Searles VB, Anderson N, Keeney J, Dumas L, Sikela JM (March 2014).
1159: 841: 825: 453: 448:
they had, further suggesting a critical period of activity of CON1 and CON2.
407: 267:, and all of these genes have been implicated in the development of neurons. 218: 210: 1979: 1962: 1743: 949: 318:
Research has found that the Olduvai domain has a role in the development of
2056: 1988: 1947: 1896: 1845: 1796: 1761: 1709: 1660: 1611: 1559: 1508: 1450: 1398: 1323: 1278: 1229: 1178: 1127: 1078: 1027: 957: 909: 845: 581: 561: 517: 466: 421: 396: 392: 388: 327: 298: 222: 1691: 1009: 2016: 1961:
Vandepoele K, Van Roy N, Staes K, Speleman F, van Roy F (November 2005).
994:"Evolutionary history and genome organization of DUF1220 protein domains" 848:, to reflect data indicating its role in human brain size and evolution. 606: 565: 505: 400: 302: 225:, to reflect data indicating its role in human brain size and evolution. 206: 1380: 991: 1827: 811: 631: 525: 509: 489: 279: 254: 399:
index. CON1 and CON2 number had been previously found to correlate to
217:(in increased copies). In 2018, it was named by its discoverers after 585: 557: 529: 521: 363: 287: 275: 261:
genes via duplication. Myomegalin itself arose from a duplication of
251: 94: 874:"Changing the name of the NBPF/DUF1220 domain to the Olduvai domain" 174:
http://www.bmrb.wisc.edu/data_library/summary/index.php?bmrbId=27775
170:
http://www.bmrb.wisc.edu/data_library/summary/index.php?bmrbId=27533
166:
http://www.bmrb.wisc.edu/data_library/summary/index.php?bmrbId=27569
2091: 1642: 1339:"Improving lives affected by schizophrenia-related brain disorders" 1297:"Psychosis and autism as diametrical disorders of the social brain" 692: 662: 538:, which would eventually later give rise to a family of duplicated 501: 263: 65: 655: 1624: 1363:
Searles Quick VB, Davis JM, Olincy A, Sikela JM (December 2015).
786: 573: 497: 322:. Specifically, it appears to function to increase the number of 283: 243: 239: 89: 844:
in Tanzania, one of the most important archaeological sites for
297:
In the human genome, DUF1220 sequences are located primarily on
221:
in Tanzania, one of the most important archaeological sites for
1728:"DUF1220 domains, cognitive disease, and human brain evolution" 781: 764: 747: 735: 729: 682:
located on 1p11.2. While chimpanzee and gorilla have copies of
611: 569: 513: 441: 429: 319: 214: 205:
that shows a striking human lineage-specific (HLS) increase in
148: 1960: 1414: 1362: 824:
at 1q36 (i.e. it was located at the breakpoint) in a boy with
2035:(September 2006). "Mining the molecules that made our mind". 816: 699:
gene with its DUF1220 domains in the same orientation as its
534: 274:(~289, with person-to-person variations), reduced in African 271: 459: 2087: 927: 806: 794: 790: 771:(CGH), which takes single DNA strands from each source and 696: 540: 230: 110: 53: 1472: 1191: 357: 1909: 1809: 1091: 820:) being found to have existed at and been disrupted by a 760: 577: 1242: 1041:
Astling DP, Heft IE, Jones KL, Sikela JM (August 2017).
1859:
Fiddes IT, Pollen AA, Davis JM, Sikela JM (July 2019).
1858: 1673: 371: 2086:
This article incorporates text from the public domain
1040: 840:
In 2018, DUF1220 was renamed by its discoverers after
775:
them, or joins them such that they line up, and uses
733:) to 132 (i.e., adding 119 DUF1220 copies encoded by 306:
domains do not show any interactions as suggested by
987: 985: 983: 981: 979: 977: 975: 617: 1732:
Cold Spring Harbor Symposia on Quantitative Biology
1575: 1410: 1408: 1243:Davis JM, Searles Quick VB, Sikela JM (June 2015). 428:thickness that appeared to be the result of mature 1852: 27:Protein domain implicated in human brain evolution 1140: 972: 2101: 1405: 2071: 1721: 1719: 1571: 1569: 1468: 1466: 1464: 1462: 1460: 656:Relation to NOTCH2NL genes in brain development 1141:Keeney JG, Dumas L, Sikela JM (24 June 2014). 923: 921: 919: 867: 865: 863: 861: 213:(in reduced copies) and increased severity of 1291: 871: 1954: 1903: 1803: 1768: 1716: 1667: 1618: 1576:Sikela JM, Searles Quick VB (January 2018). 1566: 1457: 1356: 436:It was found that CON2's effects on IQ were 1725: 1524:"Autism As a Disorder of High Intelligence" 1336: 916: 858: 630:(in which the region around a chromosome's 410:surface area appeared to correlate with a 2072:Lemonick MD, Dorfman A (1 October 2006). 1978: 1937: 1927: 1886: 1876: 1835: 1774: 1751: 1699: 1650: 1601: 1549: 1539: 1498: 1440: 1388: 1268: 1219: 1209: 1168: 1158: 1117: 1068: 1058: 1017: 899: 889: 460:1q21.1 deletion and duplication syndromes 469:and the more general classifications of 334: 2031: 769:array comparative genomic hybridization 358:Cognitive brain function and brain size 14: 2102: 1521: 270:Olduvai copy number is the highest in 2006: 833:genes, and they named the domain the 614:) approximately 6 million years ago. 238:and experienced a rapid expansion in 1344:. Letter to Dr. Elinore McCance-Katz 645:non-allelic homologous recombination 1680:The New England Journal of Medicine 600:, and together they were named the 328:prolonging the developmental period 257:, believed to be the origin of the 24: 1999: 1421:American Journal of Human Genetics 572:). It was also found that several 310:backbone chemical shift analyses. 25: 2126: 1337:Stalters L, Cho R (21 May 2018). 1310:(3): 241–61, discussion 261–320. 1304:The Behavioral and Brain Sciences 618:Evolutionary adaptation in humans 228:Olduvai domains form the core of 801:when entered into its database. 348: 1967:Molecular Biology and Evolution 1777:Current Opinion in Cell Biology 1515: 1330: 1147:Frontiers in Human Neuroscience 234:genes, which first appeared in 1285: 1236: 1185: 1134: 1085: 1034: 891:10.12688/f1000research.13586.1 660:There are four human-specific 13: 1: 2049:10.1126/science.313.5795.1908 872:Sikela JM, van Roy F (2018). 851: 524:of myomegalin can be seen in 387:studied. Most notably, right 105:Available protein structures: 1929:10.1371/journal.pbio.0020207 1522:Crespi BJ (1 January 2016). 1211:10.1371/journal.pgen.1004241 1098:Biomolecular NMR Assignments 483: 7: 1726:Dumas L, Sikela JM (2009). 799:domains of unknown function 475:1q21.1 duplication syndrome 313: 10: 2131: 2085: 2074:"What Makes us Different?" 1878:10.1007/s00439-019-02018-4 1433:10.1016/j.ajhg.2012.07.016 1110:10.1007/s12104-019-09902-0 754: 308:nuclear magnetic resonance 195:domain of unknown function 1789:10.1016/j.ceb.2005.11.004 1594:10.1007/s00439-017-1865-9 1528:Frontiers in Neuroscience 1491:10.1007/s00439-014-1489-2 1316:10.1017/S0140525X08004214 1295:, Badcock C (June 2008). 1261:10.1007/s00439-015-1537-6 1060:10.1186/s12864-017-3976-z 822:chromosomal translocation 678:, located on 1q21.1, and 500:(duplicated relative) of 438:strongly dependent on sex 403:volume in another study. 339: 159: 147: 127: 109: 104: 100: 88: 76: 64: 52: 44: 39: 34: 1541:10.3389/fnins.2016.00300 1369:Translational Psychiatry 1160:10.3389/fnhum.2014.00427 508:protein involved in the 471:1q21.1 deletion syndrome 1744:10.1101/sqb.2009.74.025 950:10.1126/science.1127980 639:) have difficulties in 548:gene has been found in 2076:. Time. Archived from 598:human lineage-specific 446:copy number variations 290:), further reduced in 189:, known until 2018 as 1980:10.1093/molbev/msi222 1692:10.1056/NEJMoa0805384 1010:10.1534/g3.112.003061 797:placeholder name for 628:pericentric inversion 588:) had lost the gene. 335:Clinical significance 2017:10.1038/news060828-5 719:paralogs (and their 544:genes. At least one 1381:10.1038/tp.2015.192 942:2006Sci...313.1304P 602:HLS DUF1220 triplet 2080:on 4 October 2006. 1828:10.1101/gr.6557307 777:fluorescent dyeing 643:which can lead to 385:lobes of the brain 2043:(5795): 1908–11. 610:(chimpanzees and 324:neural stem cells 292:Old World monkeys 236:placental mammals 183: 182: 179: 178: 154:structure summary 16:(Redirected from 2122: 2081: 2068: 2028: 1993: 1992: 1982: 1958: 1952: 1951: 1941: 1931: 1907: 1901: 1900: 1890: 1880: 1856: 1850: 1849: 1839: 1807: 1801: 1800: 1772: 1766: 1765: 1755: 1723: 1714: 1713: 1703: 1671: 1665: 1664: 1654: 1622: 1616: 1615: 1605: 1573: 1564: 1563: 1553: 1543: 1519: 1513: 1512: 1502: 1470: 1455: 1454: 1444: 1412: 1403: 1402: 1392: 1360: 1354: 1353: 1351: 1349: 1343: 1334: 1328: 1327: 1301: 1289: 1283: 1282: 1272: 1240: 1234: 1233: 1223: 1213: 1189: 1183: 1182: 1172: 1162: 1138: 1132: 1131: 1121: 1089: 1083: 1082: 1072: 1062: 1038: 1032: 1031: 1021: 989: 970: 969: 936:(5791): 1304–7. 925: 914: 913: 903: 893: 869: 715:gene. While the 554:Euarchontoglires 550:Laurasiatherians 417:neural stem cell 278:(~125 copies in 102: 101: 32: 31: 21: 2130: 2129: 2125: 2124: 2123: 2121: 2120: 2119: 2115:Protein domains 2100: 2099: 2098: 2084: 2002: 2000:Further reading 1997: 1996: 1973:(11): 2265–74. 1959: 1955: 1908: 1904: 1857: 1853: 1816:Genome Research 1808: 1804: 1773: 1769: 1724: 1717: 1686:(16): 1685–99. 1672: 1668: 1637:(12): 1466–71. 1631:Nature Genetics 1623: 1619: 1574: 1567: 1520: 1516: 1471: 1458: 1413: 1406: 1361: 1357: 1347: 1345: 1341: 1335: 1331: 1299: 1290: 1286: 1241: 1237: 1204:(3): e1004241. 1190: 1186: 1139: 1135: 1090: 1086: 1039: 1035: 990: 973: 926: 917: 870: 859: 854: 785:(then known as 757: 658: 620: 560:(but not other 528:as far back as 486: 462: 360: 351: 342: 337: 316: 28: 23: 22: 15: 12: 11: 5: 2128: 2118: 2117: 2112: 2083: 2082: 2069: 2029: 2003: 2001: 1998: 1995: 1994: 1953: 1902: 1871:(7): 715–721. 1865:Human Genetics 1851: 1822:(9): 1266–77. 1802: 1767: 1715: 1666: 1643:10.1038/ng.279 1617: 1582:Human Genetics 1565: 1514: 1479:Human Genetics 1456: 1404: 1355: 1329: 1284: 1249:Human Genetics 1235: 1184: 1133: 1104:(2): 339–343. 1084: 1033: 971: 915: 884:(2185): 2185. 856: 855: 853: 850: 763:species using 756: 753: 657: 654: 637:heterozygosity 619: 616: 596:and HLS3, for 564:), but not in 485: 482: 461: 458: 359: 356: 350: 347: 341: 338: 336: 333: 315: 312: 203:protein domain 197:1220) and the 187:Olduvai domain 181: 180: 177: 176: 163: 157: 156: 151: 145: 144: 131: 125: 124: 114: 107: 106: 98: 97: 92: 86: 85: 80: 74: 73: 68: 62: 61: 56: 50: 49: 46: 42: 41: 37: 36: 35:Olduvai domain 26: 9: 6: 4: 3: 2: 2127: 2116: 2113: 2111: 2108: 2107: 2105: 2097: 2093: 2089: 2079: 2075: 2070: 2066: 2062: 2058: 2054: 2050: 2046: 2042: 2038: 2034: 2030: 2026: 2022: 2018: 2014: 2010: 2005: 2004: 1990: 1986: 1981: 1976: 1972: 1968: 1964: 1957: 1949: 1945: 1940: 1935: 1930: 1925: 1921: 1917: 1913: 1906: 1898: 1894: 1889: 1884: 1879: 1874: 1870: 1866: 1862: 1855: 1847: 1843: 1838: 1833: 1829: 1825: 1821: 1817: 1813: 1806: 1798: 1794: 1790: 1786: 1783:(1): 95–101. 1782: 1778: 1771: 1763: 1759: 1754: 1749: 1745: 1741: 1737: 1733: 1729: 1722: 1720: 1711: 1707: 1702: 1697: 1693: 1689: 1685: 1681: 1677: 1670: 1662: 1658: 1653: 1648: 1644: 1640: 1636: 1632: 1628: 1621: 1613: 1609: 1604: 1599: 1595: 1591: 1587: 1583: 1579: 1572: 1570: 1561: 1557: 1552: 1547: 1542: 1537: 1533: 1529: 1525: 1518: 1510: 1506: 1501: 1496: 1492: 1488: 1484: 1480: 1476: 1469: 1467: 1465: 1463: 1461: 1452: 1448: 1443: 1438: 1434: 1430: 1427:(3): 444–54. 1426: 1422: 1418: 1411: 1409: 1400: 1396: 1391: 1386: 1382: 1378: 1374: 1370: 1366: 1359: 1340: 1333: 1325: 1321: 1317: 1313: 1309: 1305: 1298: 1294: 1288: 1280: 1276: 1271: 1266: 1262: 1258: 1255:(6): 569–75. 1254: 1250: 1246: 1239: 1231: 1227: 1222: 1217: 1212: 1207: 1203: 1199: 1198:PLOS Genetics 1195: 1188: 1180: 1176: 1171: 1166: 1161: 1156: 1152: 1148: 1144: 1137: 1129: 1125: 1120: 1115: 1111: 1107: 1103: 1099: 1095: 1088: 1080: 1076: 1071: 1066: 1061: 1056: 1052: 1048: 1044: 1037: 1029: 1025: 1020: 1015: 1011: 1007: 1004:(9): 977–86. 1003: 999: 995: 988: 986: 984: 982: 980: 978: 976: 967: 963: 959: 955: 951: 947: 943: 939: 935: 931: 924: 922: 920: 911: 907: 902: 897: 892: 887: 883: 879: 878:F1000Research 875: 868: 866: 864: 862: 857: 849: 847: 843: 842:Olduvai Gorge 838: 836: 832: 827: 826:neuroblastoma 823: 819: 818: 813: 809: 808: 802: 800: 796: 792: 788: 784: 783: 778: 774: 770: 766: 762: 752: 750: 749: 744: 743: 738: 737: 732: 731: 726: 722: 718: 714: 711:gene and one 710: 706: 702: 698: 694: 691: 690: 685: 681: 677: 673: 669: 665: 664: 653: 650: 646: 642: 641:recombination 638: 633: 629: 624: 615: 613: 609: 608: 603: 599: 594: 589: 587: 583: 579: 575: 571: 567: 563: 559: 555: 551: 547: 543: 542: 537: 536: 531: 527: 523: 519: 515: 511: 507: 503: 499: 495: 491: 481: 478: 476: 472: 468: 457: 455: 454:schizophrenia 449: 447: 443: 439: 434: 431: 427: 423: 418: 413: 409: 404: 402: 398: 394: 390: 386: 381: 378: 373: 368: 365: 355: 349:Schizophrenia 346: 332: 329: 325: 321: 311: 309: 304: 300: 295: 293: 289: 285: 281: 277: 273: 268: 266: 265: 260: 256: 253: 249: 245: 241: 237: 233: 232: 226: 224: 220: 219:Olduvai Gorge 216: 212: 211:schizophrenia 208: 204: 200: 196: 192: 188: 175: 171: 167: 164: 162: 158: 155: 152: 150: 146: 143: 139: 135: 132: 130: 126: 122: 118: 115: 112: 108: 103: 99: 96: 93: 91: 87: 84: 81: 79: 75: 72: 69: 67: 63: 60: 57: 55: 51: 47: 43: 38: 33: 30: 19: 2078:the original 2040: 2036: 2008: 1970: 1966: 1956: 1919: 1916:PLOS Biology 1915: 1905: 1868: 1864: 1854: 1819: 1815: 1805: 1780: 1776: 1770: 1735: 1731: 1683: 1679: 1669: 1634: 1630: 1620: 1585: 1581: 1531: 1527: 1517: 1485:(1): 67–75. 1482: 1478: 1424: 1420: 1375:(12): e697. 1372: 1368: 1358: 1346:. Retrieved 1332: 1307: 1303: 1287: 1252: 1248: 1238: 1201: 1197: 1187: 1150: 1146: 1136: 1101: 1097: 1087: 1050: 1047:BMC Genomics 1046: 1036: 1001: 997: 933: 929: 881: 877: 846:early humans 839: 834: 830: 815: 805: 803: 780: 758: 746: 740: 734: 728: 724: 720: 716: 712: 708: 704: 700: 687: 683: 679: 675: 671: 667: 661: 659: 625: 621: 605: 601: 597: 592: 590: 584:(containing 582:eulipotyphla 568:(containing 562:Afrotherians 545: 539: 533: 518:microcephaly 493: 487: 479: 467:TAR syndrome 463: 450: 435: 411: 405: 397:gyrification 393:white matter 389:frontal lobe 382: 369: 361: 352: 343: 317: 299:chromosome 1 296: 269: 262: 258: 229: 227: 223:early humans 198: 190: 186: 184: 29: 2110:Human genes 2009:Nature News 1922:(7): E207. 1588:(1): 1–13. 835:NBPF repeat 647:, in which 566:Xenarthrans 526:vertebrates 506:centrosomal 412:progressive 401:grey matter 303:amino acids 280:chimpanzees 248:duplication 207:copy number 199:NBPF repeat 40:Identifiers 2104:Categories 1738:: 375–82. 1348:20 October 1053:(1): 614. 852:References 812:myomegalin 773:hybridizes 632:centromere 510:cell cycle 490:myomegalin 395:volume or 288:orangutans 276:great apes 255:myomegalin 246:) through 117:structures 2096:IPR010630 2033:Pennisi E 680:NOTCH2NLR 676:NOTCH2NLC 672:NOTCH2NLB 668:NOTCH2NLA 649:deletions 586:hedgehogs 558:elephants 530:bony fish 522:Orthologs 484:Evolution 364:array CGH 286:, ~92 in 282:, ~99 in 252:mammalian 71:IPR010630 2092:InterPro 2065:44285466 2057:17008520 2025:85292818 1989:16079250 1948:15252450 1897:31087184 1846:17666543 1797:16337370 1762:19850849 1710:18784092 1661:19029900 1612:29335774 1560:27445671 1509:25287832 1451:22901949 1399:26670282 1324:18578904 1293:Crespi B 1279:25758905 1230:24651471 1179:25009482 1128:31264103 1079:28807002 1028:22973535 958:16946073 910:29399325 717:NOTCH2NL 709:NOTCH2NL 705:NOTCH2NL 701:NOTCH2NL 693:paralogs 684:NOTCH2NL 663:NOTCH2NL 635:form of 502:CDK5RAP2 426:cortical 422:cultures 408:temporal 314:Function 284:gorillas 264:CDK5RAP2 134:RCSB PDB 66:InterPro 2037:Science 1888:6611739 1837:1950895 1753:2902282 1701:2703742 1652:2680128 1603:5898792 1551:4927579 1534:: 300. 1500:5898241 1442:3511999 1390:5068589 1270:5886748 1221:3961203 1170:4067907 1153:: 427. 1119:6715528 1070:5556342 1019:3429928 966:6878260 938:Bibcode 930:Science 901:5773923 787:MGC8902 755:History 666:genes: 612:bonobos 574:rodents 514:neurons 498:paralog 494:PDE4DIP 320:neurons 244:simians 240:monkeys 201:, is a 191:DUF1220 95:PS51316 90:PROSITE 83:SM01148 59:PF06758 48:Olduvai 18:DUF1220 2063:  2055:  2023:  1987:  1946:  1939:449870 1936:  1895:  1885:  1844:  1834:  1795:  1760:  1750:  1708:  1698:  1659:  1649:  1610:  1600:  1558:  1548:  1507:  1497:  1449:  1439:  1397:  1387:  1322:  1277:  1267:  1228:  1218:  1177:  1167:  1126:  1116:  1077:  1067:  1026:  1016:  964:  956:  908:  898:  782:NBPF15 767:-wide 765:genome 748:NBPF19 742:NBPF14 736:NBPF10 730:NBPF26 695:is an 570:sloths 492:gene ( 442:autism 430:neuron 340:Autism 272:humans 215:autism 149:PDBsum 123:  113:  45:Symbol 2061:S2CID 2021:S2CID 1342:(PDF) 1300:(PDF) 962:S2CID 817:NBPF1 689:NOTCH 535:NBPF1 512:, of 78:SMART 2090:and 2088:Pfam 2053:PMID 1985:PMID 1944:PMID 1893:PMID 1842:PMID 1793:PMID 1758:PMID 1706:PMID 1657:PMID 1608:PMID 1556:PMID 1505:PMID 1447:PMID 1395:PMID 1350:2018 1320:PMID 1275:PMID 1226:PMID 1175:PMID 1124:PMID 1075:PMID 1024:PMID 954:PMID 906:PMID 831:NBPF 807:NBPF 804:The 795:Pfam 791:cDNA 745:and 725:NBPF 721:NBPF 713:NBPF 697:NBPF 674:and 593:NBPF 580:and 578:bats 556:and 546:NBPF 541:NBPF 504:, a 473:and 377:WISC 259:NBPF 231:NBPF 185:The 142:PDBj 138:PDBe 121:ECOD 111:Pfam 54:Pfam 2045:doi 2041:313 2013:doi 1975:doi 1934:PMC 1924:doi 1883:PMC 1873:doi 1869:138 1832:PMC 1824:doi 1785:doi 1748:PMC 1740:doi 1696:PMC 1688:doi 1684:359 1647:PMC 1639:doi 1598:PMC 1590:doi 1586:137 1546:PMC 1536:doi 1495:PMC 1487:doi 1483:134 1437:PMC 1429:doi 1385:PMC 1377:doi 1312:doi 1265:PMC 1257:doi 1253:134 1216:PMC 1206:doi 1165:PMC 1155:doi 1114:PMC 1106:doi 1065:PMC 1055:doi 1014:PMC 1006:doi 946:doi 934:313 896:PMC 886:doi 761:ape 751:). 607:Pan 326:by 161:PDB 129:PDB 2106:: 2094:: 2059:. 2051:. 2039:. 2019:. 2011:. 1983:. 1971:22 1969:. 1965:. 1942:. 1932:. 1918:. 1914:. 1891:. 1881:. 1867:. 1863:. 1840:. 1830:. 1820:17 1818:. 1814:. 1791:. 1781:18 1779:. 1756:. 1746:. 1736:74 1734:. 1730:. 1718:^ 1704:. 1694:. 1682:. 1678:. 1655:. 1645:. 1635:40 1633:. 1629:. 1606:. 1596:. 1584:. 1580:. 1568:^ 1554:. 1544:. 1532:10 1530:. 1526:. 1503:. 1493:. 1481:. 1477:. 1459:^ 1445:. 1435:. 1425:91 1423:. 1419:. 1407:^ 1393:. 1383:. 1371:. 1367:. 1318:. 1308:31 1306:. 1302:. 1273:. 1263:. 1251:. 1247:. 1224:. 1214:. 1202:10 1200:. 1196:. 1173:. 1163:. 1149:. 1145:. 1122:. 1112:. 1102:13 1100:. 1096:. 1073:. 1063:. 1051:18 1049:. 1045:. 1022:. 1012:. 1000:. 998:G3 996:. 974:^ 960:. 952:. 944:. 932:. 918:^ 904:. 894:. 880:. 876:. 860:^ 837:. 789:, 739:, 670:, 576:, 552:, 520:. 477:. 456:. 372:IQ 172:, 168:, 140:; 136:; 119:/ 2067:. 2047:: 2027:. 2015:: 1991:. 1977:: 1950:. 1926:: 1920:2 1899:. 1875:: 1848:. 1826:: 1799:. 1787:: 1764:. 1742:: 1712:. 1690:: 1663:. 1641:: 1614:. 1592:: 1562:. 1538:: 1511:. 1489:: 1453:. 1431:: 1401:. 1379:: 1373:5 1352:. 1326:. 1314:: 1281:. 1259:: 1232:. 1208:: 1181:. 1157:: 1151:8 1130:. 1108:: 1081:. 1057:: 1030:. 1008:: 1002:2 968:. 948:: 940:: 912:. 888:: 882:6 242:( 193:( 20:)

Index

DUF1220
Pfam
PF06758
InterPro
IPR010630
SMART
SM01148
PROSITE
PS51316
Pfam
structures
ECOD
PDB
RCSB PDB
PDBe
PDBj
PDBsum
structure summary
PDB
http://www.bmrb.wisc.edu/data_library/summary/index.php?bmrbId=27569
http://www.bmrb.wisc.edu/data_library/summary/index.php?bmrbId=27533
http://www.bmrb.wisc.edu/data_library/summary/index.php?bmrbId=27775
domain of unknown function
protein domain
copy number
schizophrenia
autism
Olduvai Gorge
early humans
NBPF

Text is available under the Creative Commons Attribution-ShareAlike License. Additional terms may apply.