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Pribnow box

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1003: 94:
during initiation of transcription. This region of the DNA is also the first place where base pairs separate during prokaryotic transcription to allow access to the template strand. The AT-richness is important to allow this separation, since
67:—that is, it shows the most frequently occurring base at each position in many promoters analyzed; individual promoters often vary from the consensus at one or more positions. It is also commonly called the 119: 305: 233: 115: 108: 1044: 560: 706: 938: 910: 963: 905: 1063: 958: 926: 900: 1037: 553: 586: 75:, because it is centered roughly ten base pairs upstream from the site of initiation of transcription. 783: 719: 689: 667: 577: 569: 56: 1068: 884: 573: 370:"Structural Basis for Promoter −10 Element Recognition by the Bacterial RNA Polymerase σ Subunit" 187: 1030: 793: 546: 489: 423: 977: 972: 840: 742: 419:"Base-stacking and base-pairing contributions into thermal stability of the DNA double helix" 874: 788: 754: 648: 314: 242: 8: 857: 825: 711: 685: 538: 318: 301:"Nucleotide sequence of an RNA polymerase binding site from the DNA of Bacteriophage fd" 246: 626: 453: 418: 394: 369: 192: 64: 48: 519: 477: 417:
Yakovchuk, Peter; Protozanova, Ekaterina; Frank-Kamenetskii, Maxim D. (January 2006).
345: 300: 273: 228: 1018: 945: 524: 506: 458: 440: 399: 350: 332: 278: 260: 867: 850: 514: 498: 448: 432: 389: 381: 340: 322: 268: 250: 731: 1014: 941: 929: 879: 385: 229:"Nucleotide sequence of an RNA polymerase binding site at an early T7 promoter" 91: 1057: 643: 510: 444: 336: 264: 104: 502: 462: 403: 528: 354: 327: 282: 255: 125: 798: 701: 436: 982: 676: 631: 621: 616: 611: 606: 32: 638: 416: 83: 299:
Schaller, Heinz; Gray, Christopher; Herrman, Karin (February 1975).
1010: 845: 835: 204: 79: 60: 1002: 805: 672: 100: 96: 87: 44: 40: 36: 601: 16:
DNA sequence required in bacterial promoters for transcription
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Harley, Calvin B.; Reynolds, Robert P. (March 1987).
298: 191:, in reference to the chamber holding simulation 103:are easier to break apart (not only due to fewer 1055: 185:The term "Pribnow box" is used in episode 13 of 126:Probability of occurrence of each nucleotide in 475: 367: 294: 292: 78:The Pribnow box has a function similar to the 1038: 554: 222: 220: 90:: it is recognized and bound by a subunit of 410: 289: 1045: 1031: 561: 547: 217: 518: 452: 393: 344: 326: 272: 254: 368:Feklistov, Andrey; Darst, Seth (2011). 226: 47:, etc.) that is an essential part of a 1056: 707:Histone acetylation and deacetylation 542: 997: 13: 14: 1080: 1001: 911:Archaeal transcription factor B 469: 361: 1: 227:Pribnow, David (March 1975). 210: 180: 1017:. You can help Knowledge by 82:that occurs in promoters in 7: 198: 10: 1085: 996: 587:Transcriptional regulation 386:10.1016/j.cell.2011.10.041 954: 919: 893: 818: 784:Transcription coregulator 776: 753: 730: 720:Histone acetyltransferase 690:Histone methyltransferase 668:Histone-modifying enzymes 666: 659: 594: 585: 107:, but also due to weaker 63:. It is an idealized or 885:Internal control region 188:Neon Genesis Evangelion 490:Nucleic Acids Research 424:Nucleic Acids Research 195:for testing purposes. 978:Intrinsic termination 743:DNA methyltransferase 503:10.1093/nar/15.5.2343 328:10.1073/pnas.72.2.737 256:10.1073/pnas.72.3.784 1064:Regulatory sequences 755:Chromatin remodeling 176:From Harley et al.: 25:Pribnow-Schaller box 712:Histone deacetylase 702:Histone demethylase 686:Histone methylation 482:promoter sequences" 319:1975PNAS...72..737S 247:1975PNAS...72..784P 177: 27:) is a sequence of 23:(also known as the 437:10.1093/nar/gkj454 175: 114:It is named after 65:consensus sequence 1026: 1025: 991: 990: 946:RNA polymerase II 814: 813: 772: 771: 178: 174: 1076: 1047: 1040: 1033: 1005: 998: 868:Response element 851:Response element 664: 663: 592: 591: 563: 556: 549: 540: 539: 533: 532: 522: 497:(5): 2343–2361. 486: 473: 467: 466: 456: 414: 408: 407: 397: 365: 359: 358: 348: 330: 296: 287: 286: 276: 258: 224: 133: 132: 1084: 1083: 1079: 1078: 1077: 1075: 1074: 1073: 1054: 1053: 1052: 1051: 994: 992: 987: 962: 956: 950: 915: 889: 810: 768: 749: 732:DNA methylation 726: 670: 655: 581: 567: 537: 536: 484: 474: 470: 415: 411: 366: 362: 297: 290: 225: 218: 213: 201: 183: 131: 17: 12: 11: 5: 1082: 1072: 1071: 1069:Genetics stubs 1066: 1050: 1049: 1042: 1035: 1027: 1024: 1023: 1006: 989: 988: 986: 985: 980: 975: 969: 967: 952: 951: 949: 948: 942:RNA polymerase 936: 930:RNA polymerase 923: 921: 917: 916: 914: 913: 908: 903: 897: 895: 891: 890: 888: 887: 882: 877: 872: 871: 870: 865: 855: 854: 853: 848: 843: 838: 833: 822: 820: 816: 815: 812: 811: 809: 808: 803: 802: 801: 796: 791: 780: 778: 774: 773: 770: 769: 767: 766: 760: 758: 751: 750: 748: 747: 746: 745: 737: 735: 728: 727: 725: 724: 723: 722: 717: 704: 699: 698: 697: 682: 680: 661: 657: 656: 654: 653: 652: 651: 646: 636: 635: 634: 629: 624: 619: 614: 609: 598: 596: 589: 583: 582: 566: 565: 558: 551: 543: 535: 534: 468: 431:(2): 564–574. 409: 380:(6): 1257–69. 360: 313:(2): 737–741. 288: 241:(3): 784–788. 215: 214: 212: 209: 208: 207: 200: 197: 182: 179: 173: 172: 169: 166: 163: 160: 157: 153: 152: 149: 146: 143: 140: 137: 130: 124: 120:Heinz Schaller 105:hydrogen bonds 92:RNA polymerase 15: 9: 6: 4: 3: 2: 1081: 1070: 1067: 1065: 1062: 1061: 1059: 1048: 1043: 1041: 1036: 1034: 1029: 1028: 1022: 1020: 1016: 1013:article is a 1012: 1007: 1004: 1000: 999: 995: 984: 981: 979: 976: 974: 971: 970: 968: 965: 960: 953: 947: 943: 940: 937: 935: 931: 928: 925: 924: 922: 918: 912: 909: 907: 904: 902: 899: 898: 896: 892: 886: 883: 881: 878: 876: 873: 869: 866: 864: 861: 860: 859: 856: 852: 849: 847: 844: 842: 839: 837: 834: 832: 829: 828: 827: 824: 823: 821: 817: 807: 804: 800: 797: 795: 792: 790: 787: 786: 785: 782: 781: 779: 775: 765: 762: 761: 759: 756: 752: 744: 741: 740: 739: 738: 736: 733: 729: 721: 718: 716: 713: 710: 709: 708: 705: 703: 700: 696: 693: 692: 691: 687: 684: 683: 681: 678: 674: 669: 665: 662: 658: 650: 649:trp repressor 647: 645: 644:lac repressor 642: 641: 640: 637: 633: 630: 628: 625: 623: 620: 618: 615: 613: 610: 608: 605: 604: 603: 600: 599: 597: 593: 590: 588: 584: 579: 575: 571: 570:Transcription 564: 559: 557: 552: 550: 545: 544: 541: 530: 526: 521: 516: 512: 508: 504: 500: 496: 492: 491: 485:(PDF, 0.9 MB) 483: 481: 478:"Analysis of 472: 464: 460: 455: 450: 446: 442: 438: 434: 430: 426: 425: 420: 413: 405: 401: 396: 391: 387: 383: 379: 375: 371: 364: 356: 352: 347: 342: 338: 334: 329: 324: 320: 316: 312: 308: 307: 302: 295: 293: 284: 280: 275: 270: 266: 262: 257: 252: 248: 244: 240: 236: 235: 230: 223: 221: 216: 206: 203: 202: 196: 194: 190: 189: 170: 167: 164: 161: 158: 155: 154: 150: 147: 144: 141: 138: 135: 134: 129: 123: 121: 117: 116:David Pribnow 112: 110: 109:base stacking 106: 102: 98: 93: 89: 85: 81: 76: 74: 70: 66: 62: 58: 57:transcription 54: 50: 46: 42: 38: 34: 30: 26: 22: 1019:expanding it 1008: 993: 830: 494: 488: 479: 471: 428: 422: 412: 377: 373: 363: 310: 304: 238: 232: 186: 184: 127: 113: 77: 72: 69:-10 sequence 68: 59:to occur in 28: 24: 20: 18: 955:Termination 831:Pribnow box 799:Corepressor 794:Coactivator 595:prokaryotic 193:Evangelions 33:nucleotides 21:Pribnow box 1058:Categories 983:Rho factor 973:Terminator 964:eukaryotic 939:eukaryotic 920:Elongation 906:Eukaryotic 894:Initiation 677:nucleosome 660:eukaryotic 632:gal operon 627:ara operon 622:Gua Operon 617:gab operon 612:trp operon 607:lac operon 578:Eukaryotic 211:References 181:In fiction 111:effects). 84:eukaryotes 959:bacterial 927:bacterial 901:Bacterial 875:Insulator 819:Promotion 789:Activator 639:Repressor 574:Bacterial 511:0305-1048 445:0305-1048 337:1091-6490 265:1091-6490 1011:genetics 880:Silencer 858:Enhancer 846:CAAT box 836:TATA box 826:Promoter 463:16449200 404:22136875 205:TATA box 199:See also 80:TATA box 61:bacteria 51:site on 49:promoter 806:Inducer 673:histone 529:3550697 480:E. coli 454:1360284 395:3245737 355:1054851 315:Bibcode 283:1093168 243:Bibcode 128:E. coli 101:thymine 97:adenine 88:archaea 73:element 45:thymine 41:adenine 37:thymine 31:of six 602:Operon 527:  520:340638 517:  509:  461:  451:  443:  402:  392:  353:  346:432391 343:  335:  281:  274:432404 271:  263:  29:TATAAT 1009:This 863:E-box 715:HDAC1 1015:stub 934:rpoB 777:both 764:CHD7 695:EZH2 525:PMID 507:ISSN 459:PMID 441:ISSN 400:PMID 374:Cell 351:PMID 333:ISSN 306:PNAS 279:PMID 261:ISSN 234:PNAS 171:89% 118:and 99:and 86:and 55:for 19:The 841:BRE 515:PMC 499:doi 449:PMC 433:doi 390:PMC 382:doi 378:147 341:PMC 323:doi 269:PMC 251:doi 168:49% 165:59% 162:52% 159:89% 156:82% 71:or 53:DNA 1060:: 944:: 932:: 679:): 576:, 523:. 513:. 505:. 495:15 493:. 487:. 457:. 447:. 439:. 429:34 427:. 421:. 398:. 388:. 376:. 372:. 349:. 339:. 331:. 321:. 311:72 309:. 303:. 291:^ 277:. 267:. 259:. 249:. 239:72 237:. 231:. 219:^ 151:T 122:. 43:, 39:, 1046:e 1039:t 1032:v 1021:. 966:) 961:, 957:( 757:: 734:: 688:/ 675:/ 671:( 580:) 572:( 562:e 555:t 548:v 531:. 501:: 465:. 435:: 406:. 384:: 357:. 325:: 317:: 285:. 253:: 245:: 148:A 145:A 142:T 139:A 136:T 35:(

Index

nucleotides
thymine
adenine
thymine
promoter
DNA
transcription
bacteria
consensus sequence
TATA box
eukaryotes
archaea
RNA polymerase
adenine
thymine
hydrogen bonds
base stacking
David Pribnow
Heinz Schaller
Neon Genesis Evangelion
Evangelions
TATA box


"Nucleotide sequence of an RNA polymerase binding site at an early T7 promoter"
PNAS
Bibcode
1975PNAS...72..784P
doi
10.1073/pnas.72.3.784

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