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Host tropism

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940: 341: 337:. This demonstrates an example of how cell surface receptors can affect the tropism of a viral pathogen. Since humans are the only organisms that have cells with these receptors, HIV only displays host tropism for humans. Simian immunodeficiency virus (SIV), a virus similar to HIV, is capable of infecting primates. 120:
from their environment. These nutrients can often be provided by host tissues, and that is why some bacteria need a host for survival. Once a bacterium recognizes the host cell receptors or nutrient-rich surroundings, it colonizes the cell surface. Bacteria have various mechanisms for colonizing host
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to enter a cell. Many viral membranes contain virion surface proteins that are specific to particular host cell surface receptors. If a host cell expresses the complementary surface receptor for the virus, then the virus can attach and enter the cell. If a cell does not express these receptors, then
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Viral host tropism is determined by a combination of susceptibility and permissiveness: a host cell must be both permissive (allow viral replication) and susceptible (possess the receptor complement needed for viral entry) for a virus to establish infection. Once a virus binds to a host cell, the
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Host organisms are equipped with a variety of different defense mechanisms used to protect the host from pathogenic infection. Humans in particular possess multiple lines of defense that affect pathogenesis from beginning to end. For a virus or bacterium to display tropism for a specific host, it
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gp41 undergoes significant conformational change; folding in half and forming coiled-coils. This process pulls the viral and cellular membranes together, fusing them. The diagram above suggests that it is a T helper cell, however the co-receptor on a T helper cell for this mechanism is CXCR4 not
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and organic acids, and a decrease in the infected tissue's oxygen tension in response to pathogen-induced cell damage. Coagulation of blood (clotting) also occurs in an inflamed area, providing a physical barrier against pathogenic infection. These changes ultimately create unfavorable living
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allow the bacteria to infect human lung tissue while providing an intrinsic resistance to pharmaceuticals. M. tuberculosis enters the lung alveoler passages through aerosol droplets, and it then becomes phagocytosed by macrophages. However, since the macrophages are unable to completely kill
397:. EBV enters the body through oral transfer of saliva, and it is thought to infect more than 90% of the world's adult population. EBV may also infect epithelial cells, T cells, and natural killer cells through mechanisms different than the CD21 receptor-mediated process in B cells. 83:
A pathogen displays tropism for a specific host if it can interact with the host cells in a way that supports pathogenic growth and infection. Various factors affect the ability of a pathogen to infect a particular cell, including: the structure of the cell's
549:, which involves the adherence of intimin to translocated intimin cell surface receptors presented on the surface of epithelial cells in the gut. Along with the Type III secretion system, temperature may also effect the secretion of intimin, which increases 223:. The epidermis of the skin provides a physical barrier against pathogens, but it can easily be compromised by insect bites, animal bites, scratches or other minor skin trauma. Sweat, saliva, and tears are all chemical barriers that contain enzymes, such as 516:
clonal complex CC121 is known to exhibit multi-host tropism for both humans and rabbits. This is thought to be due to a single nucleotide mutation that evolved the CC121 complex into ST121 clonal complex, the clone capable of infecting rabbits.
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In conclusion, if a pathogen is capable of overcoming various host defenses, recognizing a host cell for infection, and successfully replicating within a host tissue, then the pathogen is likely to possess tropism for that specific host.
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host cell must then provide the necessary transcription factors needed for viral replication to occur. When the virus is able to use the cell to replicate its genetic information, the virus can spread infection throughout the body.
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that can identify pathogenic DNA or RNA; the ability of the cells and tissue to support viral or bacterial replication; and the presence of physical or chemical barriers within the cells and throughout the surrounding tissue.
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Researchers can classify pathogenic organisms by the range of species and cell types that they exhibit host tropism for. For instance, pathogens that are able to infect a wide range of hosts and tissues are said to be
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pathogens, on the other hand, are only capable of infecting a narrow range of hosts and host tissue. Knowledge of a pathogen's host specificity allows professionals in the research and medical industries to model
235:. A human's microbiota, the other microorganisms living within and on the body, compete with pathogenic organisms and play a large role in pathogenic control. Lastly, a semi-permeable membrane known as the 164:
into different virulence factors in order to aid the bacterium in pathogenesis. Many different types of virulence factors exist within pathogens, including: adherence factors, invasion factors, capsules,
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is a lining of endothelial cells separating the blood from the tissues and organs. Without this lining, viruses and bacteria could easily infect vital human organs such as the brain, lungs, and placenta.
129:, are capable of proliferating the host cell or tissues. This then allows the bacterium to surround itself in a nutrient-rich environment that protects it from immune responses and other stressors. 248:
is one of the first immune responses to pathogenic infection that many host organisms possess. Inflammation involves an elevated temperature surrounding the site of infection, accumulation of CO
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infect hosts differently than viruses do. Unlike viruses, bacteria can replicate and divide on their own without entry into a host cell. Still, to grow and divide, bacteria require certain
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Pathogens frequently enter or adhere to host cells or tissues before causing infection. For this connection to occur, the pathogen must recognize the cell's surface and then bind to it.
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from their surroundings. Even if a virus is able to bind to a host cell and transfer its genetic material through the cell membrane, the cell may not contain the necessary
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Viana, David; Comos, María; McAdam, Paul R; Ward, Melissa J.; Selva, Laura; Guinane, Caitriona M.; González-Muñoz, Beatriz M.; Tristan, Anne; Foster, Simon J (2017-04-29).
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takes over. This immune response is highly specific to pathogens and provides the host with long-lasting immunity against future infection by that specific pathogen. When
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El Costa, Hicham; Gouilly, Jordi; Mansuy, Jean-Michel; Chen, Qian; Levy, Claude; Cartron, GĂ©raldine; Veas, Francisco; Al-Daccak, Reem; Izopet, Jacques (2016-10-19).
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production allows bacteria to adhere to the host tissue surface, and it provides a protective environment ideal for bacterial growth. Some bacteria, such as
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conditions for the pathogen (i.e. pH changes, decrease in ATP, and changes in cellular metabolism) and prevent further replication and growth.
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proteins on its surface. HIV also requires a second co-receptor along with the CD4-gp120 complex to enter the target cells - either
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the virus cannot normally infect it. Therefore, if the virus cannot bind to the cell, it does not display tropism for that host.
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are currently being used by researchers to better understand the host range of a variety of different pathogenic organisms.
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related immune cells (e.g. T helper cells, macrophages or dendritic cells). These cells express a CD4 receptor, to which
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within their genomes. In particular, pathogenic bacteria are capable of translating virulence genes located within their
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must first have the means to break through the host organism's line of defense. The first line of defense, known as the
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Douam, Florian; Gaska, Jenna M.; Winer, Benjamin Y.; Ding, Qiang; von Schaewen, Markus; Ploss, Alexander (2015-01-01).
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and serves as a physical barrier that encases foreign pathogens and carries them back out of the body through snot and
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and host tissues. This explains why most pathogens are only capable of infecting a limited range of host organisms.
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due to their increased capacity to support virion replication. In adults, infection by the Zika virus may lead to
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respectively) exhibit tropism for human gut epithelial cells, leading to food poisoning and digestive problems.
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Tong, Steven Y. C.; Davis, Joshua S.; Eichenberger, Emily; Holland, Thomas L.; Fowler, Vance G. (2015-07-01).
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is any physical or chemical barrier that helps prevent entry of microorganisms into body. This includes the
310: 1405:"Staphylococcus aureus Infections: Epidemiology, Pathophysiology, Clinical Manifestations, and Management" 447:; and if the infection occurs during the first trimester of pregnancy, neurological complications such as 1526: 542: 509: 467: 427:, and the umbilical cord. On the cellular level, the Zika virus targets decidual macrophages, decidual 562: 534: 378: 1107:
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are formed within the lungs, providing an ideal environment for continued bacterial colonization.
373:(EBV) is one of eight known herpesviruses. It displays host tropism for human B cells through the 236: 370: 257: 504: 440: 386: 382: 374: 106: 85: 60: 690: 1174: 187: 146: 89: 1163:"ZIKA virus reveals broad tissue and cell tropism during the first trimester of pregnancy" 8: 1059: 277: 256:
Once a bacterium or virus overcomes the body's innate immune system, the host organism's
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and enzymes necessary for viral replication to occur and for pathogenesis to continue.
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900: 826: 780: 650: 1572: 1550: 1488: 1465:"A single natural nucleotide mutation alters bacterial pathogen host-tropism" 1428: 1371: 1311: 1251: 1194: 1128: 1085: 1023: 966: 757: 612: 436: 285: 281: 31: 512:, and food poisoning due to its tropism for human skin and soft tissue. The 340: 1506: 1446: 1389: 1329: 1269: 1212: 1136: 1093: 1041: 974: 922: 848: 802: 765: 716: 672: 630: 472: 448: 351:
Conformational change in gp120 allows for secondary interaction with CCR5.
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needed to grow and divide, they must first take in necessary nutrients and
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CCR5. If it contains a CCR5 receptor it is more likely to be a macrophage.
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is the main mode of pathogenesis for these two pathogenic forms of
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More than an estimated 30% of the world population is colonized by
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The distal tips of gp41 are inserted in to the cellular membrane.
1288:"The cell envelope glycoconjugates of Mycobacterium tuberculosis" 420: 265: 228: 161: 122: 52: 227:, that can kill bacteria and viruses. The mucus layer lines the 938: 232: 1002: 334: 322: 212: 102: 1402: 133:
Transcription factors, nutrients, and pathogenic replication
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377:-gp350/220 complex and is thought to be the cause of 304: 141:
within a host cell and for bacteria to carry out the
1462: 586: 825:Dianzani, Ferdinando; Baron, Samuel (1996-01-01). 730:Aparna, Madhu Sharma; Yadav, Sarita (2008-12-01). 648: 1570: 1057: 180: 1226:Musso, Didier; Gubler, Duane J. (2016-07-01). 995: 824: 553:infectivity and tropism for human gut cells. 459: 419:that exhibits tropism for the human maternal 688: 63:to fight against infection. Methods such as 1225: 1106: 729: 364: 347:Initial interaction between gp120 and CD4. 288:that allow long-lasting immunity to occur. 105:, for example, must often bind to specific 71:of host-adapted pathogens, and genome-wide 1524: 868:Principles of innate and adaptive immunity 1496: 1436: 1379: 1319: 1259: 1202: 1075: 1031: 956: 747: 706: 620: 96: 778: 736:Brazilian Journal of Infectious Diseases 527:Enteropathogenic and enterohaemorrhagic 495: 471:is a human-tropic bacterium that causes 339: 898: 689:Ribet, David; Pascale, Cossart (2015). 1571: 1520: 1518: 1516: 268:on a pathogen's surface, they secrete 156:Many pathogens also contain important 1458: 1456: 1345: 1341: 1339: 1281: 1279: 1156: 1154: 1053: 1051: 934: 932: 860: 858: 820: 818: 816: 814: 812: 684: 682: 644: 642: 640: 454: 400: 272:that bind to the pathogen and alert 1513: 958:10.1097/01.aids.0000233569.74769.69 781:"Chapter 7: Bacterial Pathogenesis" 605:10.1146/annurev-genet-112414-054823 520: 13: 1453: 1336: 1276: 1151: 1048: 929: 827:"Chapter 49: Nonspecific Defenses" 779:Peterson, Johnny W. (1996-01-01). 305:Human immunodeficiency virus (HIV) 16:Infection specificity of pathogens 14: 1590: 855: 809: 679: 637: 1016:10.1111/j.1600-0463.2009.02450.x 732:"Biofilms: microbes and disease" 651:"Chapter 45: Viral Pathogenesis" 295: 1525:Rosenshine, Ilan (1998-10-01). 1396: 1219: 1100: 1060:"Epstein-Barr Virus and Cancer" 989: 899:Klimpel, Gary R. (1996-01-01). 749:10.1590/S1413-86702008000600016 892: 885:The front line of host defense 875: 772: 723: 580: 198:, and nonspecific inhibitors. 1: 1543:10.1016/S0966-842X(98)01355-9 1409:Clinical Microbiology Reviews 1364:10.1128/CMR.16.3.463-496.2003 1352:Clinical Microbiology Reviews 1232:Clinical Microbiology Reviews 901:"Chapter 50: Immune Defenses" 573: 78: 1304:10.3109/10409238.2014.925420 1077:10.1158/1078-0432.CCR-0670-3 708:10.1016/j.micinf.2015.01.004 311:human immunodeficiency virus 181:Host cell defense mechanisms 7: 1346:Smith, Issar (2003-07-01). 1109:Reviews in Medical Virology 556: 10: 1595: 903:. In Baron, Samuel (ed.). 829:. In Baron, Samuel (ed.). 783:. In Baron, Samuel (ed.). 468:Mycobacterium tuberculosis 461:Mycobacterium tuberculosis 313:exhibits host tropism for 593:Annual Review of Genetics 67:, direct engineering and 1064:Clinical Cancer Research 563:Endothelial cell tropism 391:nasopharyngeal carcinoma 379:infectious mononucleosis 365:Epstein-Barr virus (EBV) 26:specificity of certain 1531:Trends in Microbiology 695:Microbes and Infection 441:mesenchymal stem cells 361: 321:can bind, through the 258:acquired immune system 215:layer, saliva, tears, 121:tissues. For example, 107:cell surface receptors 97:Cell surface receptors 88:; the availability of 510:nosocomial infections 505:Staphylococcus aureus 497:Staphylococcus aureus 343: 147:transcription factors 90:transcription factors 1421:10.1128/CMR.00134-14 1244:10.1128/CMR.00072-15 905:Medical Microbiology 831:Medical Microbiology 785:Medical Microbiology 655:Medical Microbiology 409:is a mosquito-borne 278:natural killer cells 219:, and natural human 188:innate immune system 1179:2016NatSR...635296E 237:blood-brain-barrier 143:metabolic processes 61:preventive measures 1167:Scientific Reports 888:. Garland Science. 871:. Garland Science. 543:Type III secretion 383:Burkitt's lymphoma 371:Epstein–Barr virus 362: 217:endothelial lining 204:anatomical barrier 69:assisted evolution 1187:10.1038/srep35296 985:– via Ovid. 951:(10): 1359–1367. 455:Bacterial tropism 401:Zika virus (ZIKV) 387:Hodgkin's disease 158:virulence factors 86:surface receptors 1586: 1563: 1562: 1522: 1511: 1510: 1500: 1460: 1451: 1450: 1440: 1400: 1394: 1393: 1383: 1343: 1334: 1333: 1323: 1283: 1274: 1273: 1263: 1223: 1217: 1216: 1206: 1158: 1149: 1148: 1104: 1098: 1097: 1079: 1055: 1046: 1045: 1035: 1010:(5–6): 400–412. 993: 987: 986: 960: 936: 927: 926: 896: 890: 889: 879: 873: 872: 862: 853: 852: 822: 807: 806: 776: 770: 769: 751: 727: 721: 720: 710: 686: 677: 676: 646: 635: 634: 624: 584: 530:Escherichia coli 522:Escherichia coli 65:cell engineering 1594: 1593: 1589: 1588: 1587: 1585: 1584: 1583: 1569: 1568: 1567: 1566: 1523: 1514: 1481:10.1038/ng.3219 1469:Nature Genetics 1461: 1454: 1401: 1397: 1344: 1337: 1284: 1277: 1224: 1220: 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1129:1099-1654 1086:1078-0432 1024:0903-4641 967:0269-9370 758:1413-8670 613:0066-4197 599:: 21–45. 514:S. aureus 411:arbovirus 395:lymphomas 225:lysozymes 211:, sweat, 175:exotoxins 139:replicate 118:nutrients 44:Ecotropic 28:pathogens 24:infection 1579:Virology 1573:Category 1507:25685890 1447:26016486 1390:12857778 1330:24915502 1270:27029595 1213:27759009 1145:19433994 1137:15546128 1094:14871955 1042:19400864 983:11156435 975:16791010 923:21413332 849:21413325 803:21413346 766:19287843 717:25637951 673:21413306 631:26407032 557:See also 425:placenta 266:antigens 162:plasmids 114:Bacteria 53:vaccines 1559:9807781 1498:4824278 1438:4451395 1321:4436706 1261:4861986 1204:5069472 1175:Bibcode 1033:2739573 622:5075990 551:E. coli 547:E. coli 421:decidua 123:biofilm 103:Viruses 22:is the 1557:  1549:  1505:  1495:  1487:  1445:  1435:  1427:  1388:  1381:164219 1378:  1370:  1328:  1318:  1310:  1268:  1258:  1250:  1211:  1201:  1193:  1143:  1135:  1127:  1092:  1084:  1040:  1030:  1022:  981:  973:  965:  921:  911:  847:  837:  801:  791:  764:  756:  715:  671:  661:  629:  619:  611:  439:, and 393:, and 233:phlegm 173:, and 59:, and 1141:S2CID 1003:APMIS 979:S2CID 335:CXCR4 323:gp120 213:mucus 32:hosts 1555:PMID 1547:ISSN 1503:PMID 1485:ISSN 1443:PMID 1425:ISSN 1386:PMID 1368:ISSN 1326:PMID 1308:ISSN 1266:PMID 1248:ISSN 1209:PMID 1191:ISSN 1133:PMID 1125:ISSN 1090:PMID 1082:ISSN 1038:PMID 1020:ISSN 971:PMID 963:ISSN 945:AIDS 919:PMID 909:ISBN 845:PMID 835:ISBN 799:PMID 789:ISBN 762:PMID 754:ISSN 713:PMID 669:PMID 659:ISBN 627:PMID 609:ISSN 539:EHEC 537:and 535:EPEC 405:The 375:CD21 369:The 331:CCR5 327:gp41 325:and 309:The 284:and 276:and 209:skin 1539:doi 1493:PMC 1477:doi 1433:PMC 1417:doi 1376:PMC 1360:doi 1316:PMC 1300:doi 1256:PMC 1240:doi 1199:PMC 1183:doi 1117:doi 1072:doi 1028:PMC 1012:doi 1008:117 953:doi 744:doi 703:doi 617:PMC 601:doi 333:or 319:HIV 315:CD4 201:An 1575:: 1553:. 1545:. 1533:. 1529:. 1515:^ 1501:. 1491:. 1483:. 1473:47 1471:. 1467:. 1455:^ 1441:. 1431:. 1423:. 1413:28 1411:. 1407:. 1384:. 1374:. 1366:. 1356:16 1354:. 1350:. 1338:^ 1324:. 1314:. 1306:. 1296:49 1294:. 1290:. 1278:^ 1264:. 1254:. 1246:. 1236:29 1234:. 1230:. 1207:. 1197:. 1189:. 1181:. 1169:. 1165:. 1153:^ 1139:. 1131:. 1123:. 1113:15 1111:. 1088:. 1080:. 1068:10 1066:. 1062:. 1050:^ 1036:. 1026:. 1018:. 1006:. 1000:. 977:. 969:. 961:. 949:20 947:. 943:. 931:^ 917:. 857:^ 843:. 811:^ 797:. 760:. 752:. 740:12 738:. 734:. 711:. 699:17 697:. 693:. 681:^ 667:. 653:. 639:^ 625:. 615:. 607:. 597:49 595:. 591:. 488:, 435:, 431:, 389:, 385:, 381:, 357:4. 353:3. 349:2. 345:1. 194:, 169:, 55:, 42:. 1561:. 1541:: 1535:6 1509:. 1479:: 1449:. 1419:: 1392:. 1362:: 1332:. 1302:: 1272:. 1242:: 1215:. 1185:: 1177:: 1171:6 1147:. 1119:: 1096:. 1074:: 1044:. 1014:: 955:: 925:. 851:. 805:. 768:. 746:: 719:. 705:: 675:. 633:. 603:: 533:( 250:2

Index

infection
pathogens
hosts
amphotropic
Ecotropic
pathogenesis
vaccines
medication
preventive measures
cell engineering
assisted evolution
genetic screens
surface receptors
transcription factors
Viruses
cell surface receptors
Bacteria
nutrients
biofilm
spirochetes
replicate
metabolic processes
transcription factors
polymerases
virulence factors
plasmids
siderophores
endotoxins
exotoxins
innate immune system

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