Knowledge

Glycobiology

Source 📝

239:
research and discovery. MRM is performed on a triple quadrupole (QqQ) instrument, which is set to detect a predetermined precursor ion in the first quadrupole, a fragmented in the collision quadrupole, and a predetermined fragment ion in the third quadrupole. It is a non-scanning technique, wherein each transition is detected individually and the detection of multiple transitions occurs concurrently in duty cycles. This technique is being used to characterize the immune glycome.
238:
MRM is a mass spectrometry-based technique that has recently been used for site-specific glycosylation profiling. Although MRM has been used extensively in metabolomics and proteomics, its high sensitivity and linear response over a wide dynamic range make it especially suited for glycan biomarker
259:
as a new class of drug. Additionally, the search for new anti-cancer drugs is opening up new possibilities in glycobiology. Anti-cancer drugs with new and varied action mechanisms together with anti-inflammatory and anti-infection drugs are today undergoing clinical trials. They may alleviate or
272:
Glycobiology, in which recent developments have been made possible by the latest technological advances, helps provide a more specific and precise understanding of skin aging. It has now been clearly established that glycans are major constituents of the skin and play a decisive role in skin
179:, which are always coupled together in a standard fashion. The study of glycan structures is also complicated by the lack of a direct template for their biosynthesis, contrary to the case with proteins where their amino acid sequence is determined by their corresponding 116:
are the most abundant glycoconjugates found in mammalian cells. They are found predominantly on the outer cell membrane and in secreted fluids. Glycoconjugates have been shown to be important in cell-cell interactions due to the presence on the cell surface of various
103:
Sugars may be linked to other types of biological molecule to form glycoconjugates. The enzymatic process of glycosylation creates sugars/saccharides linked to themselves and to other molecules by the glycosidic bond, thereby producing glycans.
39:) that are widely distributed in nature. Sugars or saccharides are essential components of all living things and aspects of the various roles they play in biology are researched in various medical, biochemical and biotechnological fields. 229:
Glycan arrays, like that offered by the Consortium for Functional Glycomics and Z Biotech LLC, contain carbohydrate compounds that can be screened with lectins or antibodies to define carbohydrate specificity and identify ligands.
287:
Vital to the proper functioning of skin, glycans undergo both qualitative and quantitative changes in the course of aging. The functions of communication and metabolism are impaired and the skin's architecture is degraded.
920: 202:
Advanced analytical instruments and software programs, when used in combination, can unlock the mystery of glycan structures. Current techniques for structural annotation and analysis of glycans include
186:
Glycans are secondary gene products and therefore are generated by the coordinated action of many enzymes in the subcellular compartments of a cell. Since the structure of a glycan may depend on the
844:
Oh, Jang-Hee; Kim, Yeon Kyung; Jung, Ji-Yong; Shin, Jeong-eun; Chung, Jin Ho (2011). "Changes in glycosaminoglycans and related proteoglycans in intrinsically aged human skin in vivo".
809:
Faury, G (December 2008). "The alpha-L-Rhamnose recognizing lectin site of human dermal fibroblasts functions as a signal transducer: modulation of Ca2+ fluxes and gene expression".
930: 749:
Aizpurua-Olaizola, O.; Sastre Toraño, J.; Falcon-Perez, J.M.; Williams, C.; Reichardt, N.; Boons, G.-J. (March 2018). "Mass spectrometry for glycan biomarker discovery".
264:
are molecules that are difficult to synthesize in a reproducible way, owing to their complex structure, this new field of research is highly encouraging for the future.
465:
Ma BY, Mikolajczak SA, Yoshida T, Yoshida R, Kelvin DJ, Ochi A (2004). "CD28 T cell costimulatory receptor function is negatively regulated by N-linked carbohydrates".
365: 277:
They play a crucial role in the recognition of molecules and cells, they act, most notably, at the surface of cells to deliver biological messages.
931:
http://www.healthcanal.com/medical-breakthroughs/22037-UGA-scientists-team-define-first-ever-sequence-biologically-important-carbohydrate.html
322:
Varki A, Cummings RD, Esko JD, Stanley P, Hart GW, Aebi M, Mohnen D, Kinoshita T, Packer NH, Prestegard JH, Schnaar RL, Seeberger PH (2022).
341: 121:
in addition to the glycoconjugates themselves. In addition to their function in protein folding and cellular attachment, the
194:
technology in order to produce large quantities of glycans for structural and functional studies as it is for proteins.
151:, is the systematic study of all glycan structures of a given cell type or organism" and is a subset of glycobiology. 390: 548:
Maverakis E, Kim K, Shimoda M, Gershwin M, Patel F, Wilken R, Raychaudhuri S, Ruhaak LR, Lebrilla CB (2015).
500:
Takahashi M, Tsuda T, Ikeda Y, Honke K, Taniguchi N (2004). "Role of N-glycans in growth factor signaling".
441: 78: 950: 81:
to establish the structure of some basic sugar molecules. Each year the Society of Glycobiology awards the
596: 302: 118: 380: 216: 297: 208: 49: 686: 659: 965: 17: 280:
They are instrumental in the metabolism of cells: synthesis, proliferation and differentiation
190:, activity and accessibility of the different biosynthetic enzymes, it is not possible to use 955: 945: 673: 204: 125:
of a protein can modulate the protein's function, in some cases acting as an on-off switch.
69:. This coming together was as a result of a much greater understanding of the cellular and 8: 513: 77:. However, as early as the late nineteenth century pioneering efforts were being made by 419: 960: 877: 726: 701: 635: 610: 574: 549: 525: 359: 898: 869: 861: 857: 826: 776: 731: 640: 579: 517: 482: 423: 386: 347: 337: 223: 212: 82: 70: 881: 853: 818: 766: 758: 721: 713: 630: 622: 569: 561: 529: 509: 474: 415: 329: 748: 122: 913: 822: 191: 187: 94: 323: 255:
and a few anti-flu drugs, have proven effective and highlight the importance of
762: 565: 478: 252: 160: 611:"Glycobiology simplified: diverse roles of glycan recognition in inflammation" 197: 939: 865: 780: 626: 163:
units may be coupled to each other in many different ways, as opposed to the
98: 921:"Glycans in the immune system and The Altered Glycan Theory of Autoimmunity" 550:"Glycans in the immune system and The Altered Glycan Theory of Autoimmunity" 873: 830: 735: 644: 583: 521: 486: 351: 109: 105: 66: 62: 58: 427: 333: 717: 771: 172: 164: 148: 113: 28: 226:
which uses three principal units: the ionizer, analyzer and detector.
903: 283:
They have a role to play in the structure and architecture of tissue.
140: 134: 144: 61:
to recognize the coming together of the traditional disciplines of
261: 256: 248: 168: 159:
Part of the variability seen in saccharide structures is because
36: 379:
Varki A, Cummings R, Esko J, Freeze H, Hart G, Marth J (1999).
74: 154: 85:
award for lifetime achievement in the field of glycobiology.
32: 27:
is the study of the structure, biosynthesis, and biology of
547: 464: 198:
Modern tools and techniques for glycan structure prediction
180: 406:
Rademacher TW, Parekh RB, Dwek RA (1988). "Glycobiology".
176: 499: 321: 378: 906:. monthly updated web resource, a collaboration of 794:
Olden K, Bernard BA, Humphries M, et al. (1985).
793: 328:(4th ed.). Cold Spring Harbor Laboratory Press. 233: 405: 914:
Carolyn Bertozzi's Seminar: "Chemical Glycobiology"
899:
Vendor Glycoconjugates, Glycan Recognizing Proteins
702:"A unified vision of the building blocks of life" 364:: CS1 maint: DOI inactive as of September 2024 ( 937: 543: 541: 539: 918: 843: 493: 910:and the Consortium for Functional Glycomics. 536: 260:complete current therapies. Although these 155:Challenges in the study of sugar structures 657: 599:Essentials of Glycobiology, Second Edition 222:One of the most widely used techniques is 770: 725: 634: 573: 399: 372: 315: 796:Function of glycoprotein glycans T.I.B.S 787: 651: 608: 385:. Cold Spring Harbor Laboratory Press. 938: 458: 808: 802: 699: 247:Drugs already on the market, such as 751:TrAC Trends in Analytical Chemistry 597:Cold Spring Harbor Laboratory Press 420:10.1146/annurev.bi.57.070188.004033 13: 514:10.1023/B:GLYC.0000024252.63695.5c 234:Multiple reaction monitoring (MRM) 88: 14: 977: 892: 904:The Functional Glycomics Gateway 858:10.1111/j.1600-0625.2011.01258.x 23:Defined in the narrowest sense, 919:Emanual Maverakis; et al. 837: 742: 693: 602: 590: 434: 1: 811:Biochimica et Biophysica Acta 467:Biochem. Biophys. Res. Commun 308: 823:10.1016/j.bbagen.2008.07.008 615:Journal of Leukocyte Biology 128: 57:was coined in 1988 by Prof. 7: 303:Glycan-protein interactions 291: 242: 10: 982: 763:10.1016/j.trac.2017.12.015 660:"Decoding heparan sulfate" 566:10.1016/j.jaut.2014.12.002 479:10.1016/j.bbrc.2004.03.012 382:Essentials of glycobiology 325:Essentials of Glycobiology 217:nuclear magnetic resonance 132: 92: 42: 15: 609:Schnaar, RL (June 2016). 442:"Rosalind Kornfeld Award" 298:Sugar signal transduction 219:(NMR) and lectin arrays. 209:capillary electrophoresis 50:Oxford English Dictionary 846:Experimental Dermatology 627:10.1189/jlb.3RI0116-021R 119:glycan binding receptors 336:(inactive 2024-09-12). 267: 681:Cite journal requires 18:Glycobiology (journal) 334:10.1101/9781621824213 205:liquid chromatography 16:For the journal, see 718:10.1038/ncb0908-1015 446:www.glycobiology.org 951:Branches of biology 706:Nature Cell Biology 658:Kreuger, J (2001). 700:Marth, JD (2008). 408:Annu. Rev. Biochem 53:the specific term 798:. pp. 78–82. 343:978-1-621824-21-3 224:mass spectrometry 213:mass spectrometry 83:Rosalind Kornfeld 71:molecular biology 973: 927: 925: 886: 885: 841: 835: 834: 806: 800: 799: 791: 785: 784: 774: 746: 740: 739: 729: 697: 691: 690: 684: 679: 677: 669: 667: 666: 655: 649: 648: 638: 606: 600: 594: 588: 587: 577: 545: 534: 533: 497: 491: 490: 462: 456: 455: 453: 452: 438: 432: 431: 403: 397: 396: 376: 370: 369: 363: 355: 319: 123:N-linked glycans 981: 980: 976: 975: 974: 972: 971: 970: 936: 935: 923: 895: 890: 889: 842: 838: 817:(12): 1388–94. 807: 803: 792: 788: 747: 743: 698: 694: 682: 680: 671: 670: 664: 662: 656: 652: 607: 603: 595: 591: 546: 537: 498: 494: 463: 459: 450: 448: 440: 439: 435: 404: 400: 393: 377: 373: 357: 356: 344: 320: 316: 311: 294: 270: 245: 236: 200: 192:recombinant DNA 157: 143:, analogous to 137: 131: 101: 95:Glycoconjugates 93:Main articles: 91: 89:Glycoconjugates 45: 21: 12: 11: 5: 979: 969: 968: 963: 958: 953: 948: 934: 933: 928: 916: 911: 901: 894: 893:External links 891: 888: 887: 852:(5): 454–456. 836: 801: 786: 741: 692: 683:|journal= 650: 601: 589: 535: 492: 457: 433: 414:(1): 785–838. 398: 391: 371: 342: 313: 312: 310: 307: 306: 305: 300: 293: 290: 285: 284: 281: 278: 269: 266: 253:erythropoietin 244: 241: 235: 232: 199: 196: 161:monosaccharide 156: 153: 133:Main article: 130: 127: 90: 87: 65:chemistry and 44: 41: 9: 6: 4: 3: 2: 978: 967: 966:Carbohydrates 964: 962: 959: 957: 954: 952: 949: 947: 944: 943: 941: 932: 929: 922: 917: 915: 912: 909: 905: 902: 900: 897: 896: 883: 879: 875: 871: 867: 863: 859: 855: 851: 847: 840: 832: 828: 824: 820: 816: 812: 805: 797: 790: 782: 778: 773: 768: 764: 760: 756: 752: 745: 737: 733: 728: 723: 719: 715: 712:(9): 1015–6. 711: 707: 703: 696: 688: 675: 661: 654: 646: 642: 637: 632: 628: 624: 621:(6): 825–38. 620: 616: 612: 605: 598: 593: 585: 581: 576: 571: 567: 563: 559: 555: 551: 544: 542: 540: 531: 527: 523: 519: 515: 511: 508:(3): 207–12. 507: 503: 496: 488: 484: 480: 476: 472: 468: 461: 447: 443: 437: 429: 425: 421: 417: 413: 409: 402: 394: 392:0-87969-560-9 388: 384: 383: 375: 367: 361: 353: 349: 345: 339: 335: 331: 327: 326: 318: 314: 304: 301: 299: 296: 295: 289: 282: 279: 276: 275: 274: 273:homeostasis. 265: 263: 258: 254: 250: 240: 231: 227: 225: 220: 218: 214: 210: 206: 195: 193: 189: 184: 182: 178: 174: 170: 166: 162: 152: 150: 146: 142: 136: 126: 124: 120: 115: 111: 110:proteoglycans 107: 106:Glycoproteins 100: 99:Glycosylation 96: 86: 84: 80: 76: 72: 68: 64: 60: 56: 52: 51: 47:According to 40: 38: 34: 30: 26: 19: 956:Biochemistry 946:Glycobiology 907: 849: 845: 839: 814: 810: 804: 795: 789: 754: 750: 744: 709: 705: 695: 674:cite journal 663:. Retrieved 653: 618: 614: 604: 592: 557: 553: 505: 502:Glycoconj. J 501: 495: 470: 466: 460: 449:. Retrieved 445: 436: 411: 407: 401: 381: 374: 324: 317: 286: 271: 246: 237: 228: 221: 201: 185: 158: 138: 102: 67:biochemistry 63:carbohydrate 59:Raymond Dwek 55:glycobiology 54: 48: 46: 25:glycobiology 24: 22: 772:1874/364403 560:(6): 1–13. 554:J Autoimmun 473:(1): 60–7. 173:nucleotides 165:amino acids 114:glycolipids 79:Emil Fisher 29:saccharides 940:Categories 665:2008-01-11 451:2021-11-05 309:References 188:expression 149:proteomics 35:chains or 961:Glycomics 866:1600-0625 781:0165-9936 360:cite book 141:Glycomics 135:Glycomics 129:Glycomics 882:34434784 874:21426414 831:18708125 757:: 7–14. 736:18758488 645:27004978 584:25578468 522:15090734 487:15047148 352:35536922 292:See also 243:Medicine 169:proteins 145:genomics 727:2892900 636:4952015 575:4340844 530:1110879 428:3052290 262:glycans 257:glycans 249:heparin 171:or the 75:glycans 43:History 37:glycans 908:Nature 880:  872:  864:  829:  779:  734:  724:  643:  633:  582:  572:  528:  520:  485:  426:  389:  350:  340:  215:(MS), 211:(CE), 207:(LC), 924:(PDF) 878:S2CID 526:S2CID 33:sugar 870:PMID 862:ISSN 827:PMID 815:1780 777:ISSN 732:PMID 687:help 641:PMID 580:PMID 518:PMID 483:PMID 424:PMID 387:ISBN 366:link 348:PMID 338:ISBN 268:Skin 181:gene 147:and 112:and 97:and 854:doi 819:doi 767:hdl 759:doi 755:100 722:PMC 714:doi 631:PMC 623:doi 570:PMC 562:doi 510:doi 475:doi 471:317 416:doi 330:doi 177:DNA 175:in 167:of 73:of 942:: 876:. 868:. 860:. 850:20 848:. 825:. 813:. 775:. 765:. 753:. 730:. 720:. 710:10 708:. 704:. 678:: 676:}} 672:{{ 639:. 629:. 619:99 617:. 613:. 578:. 568:. 558:57 556:. 552:. 538:^ 524:. 516:. 506:20 504:. 481:. 469:. 444:. 422:. 412:57 410:. 362:}} 358:{{ 346:. 251:, 183:. 108:, 926:. 884:. 856:: 833:. 821:: 783:. 769:: 761:: 738:. 716:: 689:) 685:( 668:. 647:. 625:: 586:. 564:: 532:. 512:: 489:. 477:: 454:. 430:. 418:: 395:. 368:) 354:. 332:: 139:" 31:( 20:.

Index

Glycobiology (journal)
saccharides
sugar
glycans
Oxford English Dictionary
Raymond Dwek
carbohydrate
biochemistry
molecular biology
glycans
Emil Fisher
Rosalind Kornfeld
Glycoconjugates
Glycosylation
Glycoproteins
proteoglycans
glycolipids
glycan binding receptors
N-linked glycans
Glycomics
Glycomics
genomics
proteomics
monosaccharide
amino acids
proteins
nucleotides
DNA
gene
expression

Text is available under the Creative Commons Attribution-ShareAlike License. Additional terms may apply.