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Concatemer

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When assembling concatemers from synthetic oligonucleotides, increasing salt concentration to 200 mM was found to be a major optimizing factor due to its ability to enhance ionic strength, which hastened the formation of concatemers.
55:. As an example, if the genes in the phage DNA are arranged ABC, then in a concatemer the genes would be ABCABCABCABC and so on (assuming synthesis was initiated between genes C and A). They are further broken by 62:
During active infection, some species of viruses have been shown to replicate their genetic material via the formation of concatemers. In the case of
68:, its entire genome is made over and over on a single strand. These long concatemers are subsequently cleaved between the pac-1 and pac-2 regions by 223:
Bernstein H, Bernstein C (July 1973). "Circular and branched circular concatenates as possible intermediates in bacteriophage T4 DNA replication".
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Oxford Dictionary of Biochemistry and Molecular Biology, 2nd ed. R. l., eds. Oxford University Press, 2006. p. 138.
117:"Cloning human herpes virus 6A genome into bacterial artificial chromosomes and study of DNA replication intermediates" 383: 357: 91: 48: 90:
intermediates included circular and branched circular concatemeric structures that likely arose by
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molecule that contains multiple copies of the same DNA sequence linked in series. These
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that occurs once in each copy of the genome). Concatemers are frequently the result of
289: 240: 236: 205: 156: 338: 260:"Characterization of self-assembled DNA concatemers from synthetic oligonucleotides" 279: 271: 232: 195: 187: 146: 136: 191: 87: 334: 275: 176:"The molecular biology of human herpesvirus-6 latency and telomere integration" 83: 377: 141: 293: 209: 160: 244: 79: 69: 330: 56: 322: 40: 28: 51:, and may be seen in the late stage of infection of bacteria by 32: 52: 24: 72:
when the genome is packaged into individual virions.
264:Computational and Structural Biotechnology Journal 222: 114: 375: 121:Proceedings of the National Academy of Sciences 358: 78:replicating DNA was labeled with tritiated 365: 351: 257: 216: 31:molecules are usually copies of an entire 283: 199: 150: 140: 115:Borenstein, Ronen; Frenkel, Niza (2009). 173: 258:Sun, Lu; Åkerman, Björn (August 2014). 376: 317: 35:linked end to end and separated by 13: 14: 400: 321: 304: 251: 167: 108: 1: 101: 337:. You can help Knowledge by 237:10.1016/0022-2836(73)90443-9 192:10.1016/j.micinf.2011.03.006 7: 10: 405: 316: 276:10.1016/j.csbj.2014.08.011 92:rolling circle replication 49:rolling circle replication 384:Repetitive DNA sequences 174:Arbuckle, Jesse (2011). 142:10.1073/pnas.0908504106 180:Microbes and Infection 23:is a long continuous 16:Type of DNA molecule 133:2009PNAS..10619138B 127:(45): 19138–19143. 65:human herpesvirus-6 45:nucleotide sequence 346: 345: 396: 367: 360: 353: 325: 318: 298: 297: 287: 255: 249: 248: 220: 214: 213: 203: 186:(8–9): 731–741. 171: 165: 164: 154: 144: 112: 86:. The observed 82:and examined by 76:Bacteriophage T4 404: 403: 399: 398: 397: 395: 394: 393: 374: 373: 372: 371: 314: 307: 302: 301: 256: 252: 221: 217: 172: 168: 113: 109: 104: 88:DNA replication 84:autoradiography 17: 12: 11: 5: 402: 392: 391: 389:Genetics stubs 386: 370: 369: 362: 355: 347: 344: 343: 326: 312: 311: 306: 303: 300: 299: 250: 215: 166: 106: 105: 103: 100: 15: 9: 6: 4: 3: 2: 401: 390: 387: 385: 382: 381: 379: 368: 363: 361: 356: 354: 349: 348: 342: 340: 336: 333:article is a 332: 327: 324: 320: 319: 315: 309: 308: 295: 291: 286: 281: 277: 273: 270:(18): 66–72. 269: 265: 261: 254: 246: 242: 238: 234: 231:(3): 355–61. 230: 226: 219: 211: 207: 202: 197: 193: 189: 185: 181: 177: 170: 162: 158: 153: 148: 143: 138: 134: 130: 126: 122: 118: 111: 107: 99: 95: 93: 89: 85: 81: 77: 73: 71: 67: 66: 60: 58: 54: 50: 46: 42: 38: 34: 30: 26: 22: 339:expanding it 328: 313: 305:Bibliography 267: 263: 253: 228: 225:J. Mol. Biol 224: 218: 183: 179: 169: 124: 120: 110: 96: 74: 63: 61: 36: 20: 18: 378:Categories 102:References 21:concatemer 80:thymidine 70:ribozymes 57:ribozymes 39:sites (a 29:polymeric 331:genetics 294:25379145 210:21458587 161:19858479 43:binding 285:4212282 245:4580243 201:3130849 152:2767366 129:Bibcode 41:protein 292:  282:  243:  208:  198:  159:  149:  53:phages 33:genome 329:This 335:stub 290:PMID 241:PMID 206:PMID 157:PMID 280:PMC 272:doi 233:doi 196:PMC 188:doi 147:PMC 137:doi 125:106 37:cos 25:DNA 380:: 288:. 278:. 268:11 266:. 262:. 239:. 229:77 227:. 204:. 194:. 184:13 182:. 178:. 155:. 145:. 135:. 123:. 119:. 94:. 59:. 19:A 366:e 359:t 352:v 341:. 296:. 274:: 247:. 235:: 212:. 190:: 163:. 139:: 131::

Index

DNA
polymeric
genome
protein
nucleotide sequence
rolling circle replication
phages
ribozymes
human herpesvirus-6
ribozymes
Bacteriophage T4
thymidine
autoradiography
DNA replication
rolling circle replication
"Cloning human herpes virus 6A genome into bacterial artificial chromosomes and study of DNA replication intermediates"
Bibcode
2009PNAS..10619138B
doi
10.1073/pnas.0908504106
PMC
2767366
PMID
19858479
"The molecular biology of human herpesvirus-6 latency and telomere integration"
doi
10.1016/j.micinf.2011.03.006
PMC
3130849
PMID

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