Knowledge

BioGRID

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that facilitates the compilation interaction records through structured evidence codes, phenotype ontologies, and gene annotation. The BioGRID architecture has been improved in order to support a broader range of interaction and post-translational modification types, to allow the representation of more complex multi-gene/protein interactions, to account for cellular phenotypes through structured ontologies, to expedite curation through semi-automated
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collectively curated from 75,988 publications for more than 80 species. BioGRID data are freely distributed through partner model organism databases and meta-databases and are directly downloadable in a variety of formats. BioGRID curation is coordinated through an Interaction Management System (IMS)
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species and humans. As of 18 October 2020, the BioGRID contains 1,928 million interactions as drawn from 63,083 publications that represent 71 model organisms. At the start of 2021 it already contained more than 2,0 million biological interactions, 29,023 chemical-protein interactions, and
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interaction data, and complex multi-gene/protein interactions. Moreover, on a monthly basis, the BioGRID continues to expand curated data and also develop and release new tools, data from comprehensive targeted curation projects, and perform targeted scientific analysis.
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Lorrie Boucher, Ashton Breitkreutz, Bobby-Joe Breitkreutz, Christie Chang, Andrew Chatr-Aryamontri, Kara Dolinski, Sven Heinicke, Nadine Kolas, Lara O'Donnell, Sara Oster, Rose Oughtred, Jennifer Rust, Adnane Sellam, Chris Stark, Jean Tang, Chandra Theesfeld, Mike
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Chatr-Aryamontri A, Breitkreutz BJ, Oughtred R, Boucher L, Heinicke S, Chen D, Stark C, Breitkreutz A, Kolas N, O'Donnell L, Reguly T, Nixon J, Ramage L, Winter A, Sellam A, Chang C, Hirschman J, Theesfeld C, Rust J, Livstone MS, Dolinski K, Tyers M (Jan 2015).
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interactions, BioGRID has taken a targeted, project-based approach to curation of human interaction data in manageable collections of high impact data. These themed curation projects represent central biological processes with disease relevance such as
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Chatr-Aryamontri A, Breitkreutz BJ, Heinicke S, Boucher L, Winter A, Stark C, Nixon J, Ramage L, Kolas N, O'Donnell L, Reguly T, Breitkreutz A, Sellam A, Chen D, Chang C, Rust JM, Livstone MS, Oughtred R, Dolinski K, Tyers M (Jan 2013).
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Reguly T, Breitkreutz A, Boucher L, Breitkreutz BJ, Hon GC, Myers CL, Parsons A, Friesen H, Oughtred R, Tong A, Stark C, Ho Y, Botstein D, Andrews B, Boone C, Troyanskya OG, Ideker T, Dolinski K, Batada NN, Tyers M (2006).
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Breitkreutz A, Choi H, Sharom JR, Boucher L, Neduva V, Larsen B, Lin ZY, Breitkreutz BJ, Stark C, Liu G, Ahn J, Dewar-Darch D, Reguly T, Tang X, Almeida R, Qin ZS, Pawson T, Gingras AC, Nesvizhskii AI, Tyers M (May 2010).
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approaches, and to enhance curation quality control. Through comprehensive curation efforts, BioGRID now includes a virtually complete set of interactions reported to date in the primary literature for budding yeast
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Chatr-Aryamontri, Andrew; Oughtred, Rose; Boucher, Lorrie; Rust, Jennifer; Chang, Christie; Kolas, Nadine K.; O'Donnell, Lara; Oster, Sara; Theesfeld, Chandra; Sellam, Adnane; Stark, Chris (2017-01-04).
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The Biological General Repository for Interaction Datasets (BioGRID) is an open access database that houses genetic and protein interactions curated from the primary biomedical literature for all major
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Oughtred, Rose; Stark, Chris; Breitkreutz, Bobby-Joe; Rust, Jennifer; Boucher, Lorrie; Chang, Christie; Kolas, Nadine; O'Donnell, Lara; Leung, Genie; McAdam, Rochelle; Zhang, Frederick (2019-08-01).
537:. As of 18 October 2020, BioGRID themed curation project efforts have resulted in the extraction of 424,631 interactions involving 2,361 proteins from more than 37,000 scientific articles. 568:, BioGRID has developed an embedded resource called the Open Repository of CRISPR Screens (ORCS) to house and distribute manually curated, comprehensive collections of CRISPR screen datasets using 1890:
Oughtred, Rose; Rust, Jennifer; Chang, Christie; Breitkreutz, Bobby-Joe; Stark, Chris; Willems, Andrew; Boucher, Lorrie; Leung, Genie; Kolas, Nadine; Zhang, Frederick; Dolma, Sonam (2020-10-18).
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specific databases, the newest version now provides a unified front end allowing for searches across several organisms simultaneously. The BioGRID was developed initially as a project at the
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of interest and retrieve annotation, as well as curated data as reported, by the primary literature and compiled by in house large-scale curation efforts. The BioGRID is hosted in
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Stark C, Breitkreutz BJ, Chatr-Aryamontri A, Boucher L, Oughtred R, Livstone MS, Nixon J, Van Auken K, Wang X, Shi X, Reguly T, Rust JM, Winter A, Dolinski K, Tyers M (Jan 2011).
27: 2411: 2375: 2314: 2209: 2393: 855: 431:. The BioGRID's original focus was on curation of binary protein-protein and genetic interactions, but has expanded over several updates to incorporate curated 1402:
Breitkreutz BJ, Stark C, Reguly T, Boucher L, Breitkreutz A, Livstone M, Oughtred R, Lackner DH, Bähler J, Wood V, Dolinski K, Tyers M (Jan 2008).
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Sadowski I, Breitkreutz BJ, Stark C, Su TC, Dahabieh M, Raithatha S, Bernhard W, Oughtred R, Dolinski K, Barreto K, Tyers M (May 2013).
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but was later renamed to the BioGRID in order to more concisely describe the project, and help distinguish it from several
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Stark C, Ting-Cheng Su, Breitkreutz A, Lourenco P, Dahabieh M, Breitkreutz BJ, Tyers M, Sadowski I (Jan 2010).
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but has since expanded to include teams at the Institut de Recherche en Immunologie et en Cancérologie at the
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Institut de Recherche en Immunologie et en Cancérologie, Lewis-Sigler Institute for Integrative Genomics,
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International Conference on Computational Intelligence Methods for Bioinformatics and Biostatistics
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is a biomedical interaction repository with data compiled through comprehensive curation efforts.
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while attempting to remove redundancy to create a single mapping of data. Users of The
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Microsoft Research - University of Trento Centre for Computational and Systems Biology
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Advanced search, integrated network viewer, custom downloads, bulk retrieval/download
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Due to the overwhelming size of published scientific literature containing human (
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Stark C, Breitkreutz BJ, Reguly T, Boucher L, Breitkreutz A, Tyers M (Jan 2006).
1074: 1035: 933: 688: 548:-based genetic screens have now been reported in numerous publications that link 212: 86: 2050: 1097: 1089: 840: 752: 632: 557: 553: 530: 450: 408: 325: 1641: 1589: 2643: 2525: 2121: 1915: 1537: 1480: 780: 1851: 1740: 1220: 2515: 2510: 2505: 1933: 1869: 1811: 1759: 1708: 1659: 1607: 1555: 1498: 1437: 1388: 1339: 1289: 1239: 1185: 917: 870: 801: 526: 167: 1988: 1529: 1472: 1419: 1370: 1321: 1302: 1271: 1252: 443: 1167: 795: 788: 772: 720: 590: 460: 344: 181: 139: 2586: 2520: 2139: 2101: 1352: 1059: 925: 656: 522: 324:. It strives to provide a comprehensive curated resource for all major 1828:"A global protein kinase and phosphatase interaction network in yeast" 1907: 1571: 599: 561: 518: 514: 379:, and the Alliance of Genome Resources. The BioGRID is funded by the 301: 59: 1792: 316:(GRID) by Mike Tyers, Bobby-Joe Breitkreutz, and Chris Stark at the 2214: 2151: 2143: 2113: 1772: 1453: 1105: 1082: 614:, and each has curated interaction data available according to the 573: 534: 436: 412: 372: 340: 305: 71: 2189: 2135: 2083: 2065: 2019: 565: 501: 376: 368: 352: 348: 336: 328: 297: 2387: 2241: 2194: 2159: 1998: 545: 388: 356: 26: 1983: 2273: 2199: 1401: 1149: 945: 578: 491: 360: 2376:
African Society for Bioinformatics and Computational Biology
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Max Planck Institute of Molecular Cell Biology and Genetics
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The following organisms are currently supported within the
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and the Lewis-Sigler Institute for Integrative Genomics at
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International Nucleotide Sequence Database Collaboration
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Institut de Recherche en iImmunologie et en Cancérologie
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projects with a similar name. Originally separated into
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Curation of Genetic, Protein, and Chemical Interactions
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created in 2003 (originally referred to as simply the
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Biological General Repository for Interaction Datasets
1948:"Build Statistics (4.2.193) - January 2021 | BioGRID" 1721: 1672: 1201: 856:
Middle East respiratory syndrome–related coronavirus
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was originally published and released as simply the
2086:, database of protein sequences grouping together 1722:Breitkreutz BJ, Stark C, Tyers M (January 2003). 2641: 2321:US National Center for Biotechnology Information 2406:International Society for Computational Biology 1673:Winter AG, Wildenhain J, Tyers M (April 2011). 1619: 1617: 1514:"The BioGRID interaction database: 2019 update" 1457:"The BioGRID interaction database: 2017 update" 1404:"The BioGRID Interaction Database: 2008 update" 1355:"The BioGRID Interaction Database: 2011 update" 1306:"The BioGRID interaction database: 2013 update" 1256:"The BioGRID interaction database: 2015 update" 1006:Severe acute respiratory syndrome coronavirus 2 2473:ISCB Africa ASBCB Conference on Bioinformatics 1567: 1565: 1197: 1195: 1145: 1143: 1141: 2420:Institute of Genomics and Integrative Biology 2035: 1202:Breitkreutz BJ, Stark C, Tyers M (Jan 2003). 1000:Severe acute respiratory syndrome coronavirus 2449:European Conference on Computational Biology 1818: 1766: 1715: 1666: 1614: 268:Yes - manual; Also focused curation efforts. 2484:Research in Computational Molecular Biology 1999:International Molecular Exchange Consortium 1562: 1395: 1346: 1296: 1246: 1192: 1138: 485: 405:General Repository for Interaction Datasets 389:International Molecular Exchange Consortium 314:General Repository for Interaction Datasets 278:Yes - both individual results and searches, 2461:International Conference on Bioinformatics 2042: 2028: 363:, United States and is partnered with the 2455:Intelligent Systems for Molecular Biology 1923: 1859: 1801: 1791: 1749: 1739: 1698: 1649: 1597: 1545: 1488: 1427: 1378: 1329: 1279: 1229: 1219: 1175: 525:system or diseases of interest including 1724:"Osprey: a network visualization system" 2443:Basel Computational Biology Conference‎ 387:. BioGRID is an observer member of the 2642: 2004:Lunenfeld-Tanenbaum Research Institute 1128:Canadian Institutes of Health Research 1114: 605: 541:Curation of Genome-Wide CRISPR Screens 417:Lunenfeld-Tanenbaum Research Institute 318:Lunenfeld-Tanenbaum Research Institute 111:Lunenfeld-Tanenbaum Research Institute 2400:International Society for Biocuration 2298:European Molecular Biology Laboratory 2023: 1885: 1883: 1881: 1879: 2622: 1449: 1447: 2426:Japanese Society for Bioinformatics 1780:The Journal of Biological Chemistry 13: 2388:European Molecular Biology network 2049: 1876: 14: 2671: 2478:Pacific Symposium on Biocomputing 2382:Australia Bioinformatics Resource 2349:Swiss Institute of Bioinformatics 2332:Netherlands Bioinformatics Centre 2292:European Bioinformatics Institute 1967: 1444: 2621: 2610: 2609: 2280:Database Center for Life Science 2268:Computational Biology Department 2156:Arabidopsis Information Resource 456:post-translational modifications 310:post-translational modifications 144:Custom flat files, PSI-MI, MITAB 64:Post-Translational Modifications 25: 2126:Specialised genomic databases: 1940: 628:PEST (African malaria mosquito) 433:post-translational modification 2327:Japanese Institute of Genetics 1505: 829:(HPV, 10, 16, 32, 5, 6B, 7, 9) 821:Human Immunodeficiency Virus 2 815:Human Immunodeficiency Virus 1 100:Mount Sinai Hospital (Toronto) 1: 2247:Rosalind (education platform) 2164:Zebrafish Information Network 2132:Saccharomyces Genome Database 1691:10.1093/bioinformatics/btr062 1132: 1124:National Institutes of Health 1122:is funded by grants from the 1052:Strongylocentrotus purpuratus 1013:Simian Immunodeficiency Virus 365:Saccharomyces Genome Database 2577:List of biological databases 2096:Protein Information Resource 1984:BioGRID-ORCS CRISPR Database 250:4.2.193; 1 January 2021 7: 2070:European Nucleotide Archive 1414:(Database issue): 637–640. 1365:(Database issue): 698–704. 1316:(Database issue): 816–823. 1266:(Database issue): 470–478. 866:(gray short-tailed opossum) 10: 2676: 994:Selaginella moellendorffii 879:Mycobacterium tuberculosis 394: 2605: 2559: 2493: 2435: 2368: 2355:Wellcome Sanger Institute 2309:J. Craig Venter Institute 2255: 2233: 2172: 2057: 986:Schizosaccharomyces pombe 903:Nicotiana tomentosiformis 697:Chlamydomonas reinhardtii 479:Schizosaccharomyces pombe 272: 264: 246: 236: 226: 221: 211: 206: 180: 162: 148: 138: 133: 125: 116: 105: 85: 80: 70: 62:, Chemical Interactions, 49: 38: 33: 24: 2338:Philippine Genome Center 1989:Themed Curation Projects 1044:Streptococcus pneumoniae 978:Saccharomyces cerevisiae 921:Japonica (Japanese rice) 729:Dictyostelium discoideum 556:viability, chemical and 486:Themed Curation Projects 467:Saccharomyces cerevisiae 2582:Molecular phylogenetics 2078:China National GeneBank 1994:Mike Tyers Lab Homepage 1852:10.1126/science.1176495 1741:10.1186/gb-2003-4-3-r22 1642:10.1093/database/bat026 1590:10.1093/database/bap026 1221:10.1186/gb-2003-4-3-r23 737:Drosophila melanogaster 585:Drosophila melanogaster 300:-protein interactions, 2286:DNA Data Bank of Japan 2074:DNA Data Bank of Japan 1518:Nucleic Acids Research 1461:Nucleic Acids Research 1408:Nucleic Acids Research 1359:Nucleic Acids Research 1310:Nucleic Acids Research 1260:Nucleic Acids Research 1156:Nucleic Acids Research 957:3D7 (malaria parasite) 665:Caenorhabditis elegans 511:chromatin modification 476:), and fission yeast ( 425:UniversitĂ© de MontrĂ©al 129:Stark & al. (2006) 92:UniversitĂ© de MontrĂ©al 2567:Computational biology 2082:Secondary databases: 1101:(African clawed frog) 954:Plasmodium falciparum 910:Oryctolagus cuniculus 887:Mycoplasma pneumoniae 863:Monodelphis domestica 811:(1,2,3,4,5,6A,6B,7,8) 335:can search for their 252:; 3 years ago 2650:Biological databases 2064:Sequence databases: 2014:Princeton University 1068:Tobacco Mosaic Virus 1020:Solanum lycopersicum 948:that infects humans) 827:Human Papillomavirus 641:Arabidopsis thaliana 588:), and house mouse ( 473:Arabidopsis thaliana 429:Princeton University 421:Mount Sinai Hospital 322:Mount Sinai Hospital 302:genetic interactions 96:Princeton University 60:Genetic Interactions 56:Protein Interactions 2360:Whitehead Institute 2148:Rat Genome Database 1952:wiki.thebiogrid.org 1844:2010Sci...328.1043B 1838:(5981): 1043–1046. 1530:10.1093/nar/gky1079 1473:10.1093/nar/gkw1102 1420:10.1093/nar/gkm1001 1371:10.1093/nar/gkq1116 1322:10.1093/nar/gks1158 1272:10.1093/nar/gku1204 1115:Funding for BioGRID 1093:(common grape vine) 849:Meleagris gallopavo 745:Emericella nidulans 705:Chlorocebus sabaeus 606:Supported Organisms 294:biological database 21: 16:Biological database 2597:Sequence alignment 2304:Flatiron Institute 1168:10.1093/nar/gkj109 1162:(90001): 535–539. 713:Cricetulus griseus 308:interactions, and 19: 2637: 2636: 2592:Sequence database 2106:Protein Data Bank 2100:Other databases: 1524:(D1): D529–D541. 1467:(D1): D369–D379. 1028:Solanum tuberosum 962:Rattus norvegicus 942:Pediculus humanus 895:Neurospora crassa 809:Human Herpesvirus 796:Hepatitis C Virus 716:(Chinese hamster) 649:Bacillus subtilis 625:Anopheles gambiae 616:latest statistics 558:stress resistance 282: 281: 242:Monthly (4 Weeks) 2667: 2660:Online databases 2625: 2624: 2613: 2612: 2572:List of biobanks 2536:Stockholm format 2344:Scripps Research 2044: 2037: 2030: 2021: 2020: 1980: 1979: 1977:Official website 1962: 1961: 1959: 1958: 1944: 1938: 1937: 1927: 1908:10.1002/pro.3978 1887: 1874: 1873: 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733: 725: 717: 709: 708:(green monkey) 701: 693: 685: 677: 669: 661: 653: 645: 637: 633:Apis mellifera 629: 620: 607: 604: 594:) in over 670 582:), fruit fly ( 542: 539: 531:Fanconi Anemia 487: 484: 451:model organism 445: 442: 409:GRID Computing 396: 393: 326:model organism 280: 279: 276: 270: 269: 266: 262: 261: 248: 244: 243: 240: 234: 233: 230: 224: 223: 219: 218: 215: 209: 208: 204: 203: 185: 178: 177: 164: 160: 159: 150: 146: 145: 142: 136: 135: 131: 130: 127: 123: 122: 118: 114: 113: 107: 103: 102: 89: 83: 82: 78: 77: 74: 68: 67: 53: 47: 46: 40: 36: 35: 31: 30: 15: 9: 6: 4: 3: 2: 2672: 2661: 2658: 2656: 2653: 2651: 2648: 2647: 2645: 2630: 2629: 2620: 2618: 2617: 2608: 2607: 2604: 2598: 2595: 2593: 2590: 2588: 2585: 2583: 2580: 2578: 2575: 2573: 2570: 2568: 2565: 2564: 2562: 2558: 2552: 2549: 2547: 2544: 2542: 2539: 2537: 2534: 2532: 2529: 2527: 2526:Pileup format 2524: 2522: 2519: 2517: 2514: 2512: 2509: 2507: 2504: 2502: 2499: 2498: 2496: 2492: 2485: 2482: 2479: 2476: 2474: 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1973: 1972: 1953: 1949: 1943: 1935: 1931: 1926: 1921: 1917: 1913: 1909: 1905: 1901: 1897: 1893: 1886: 1884: 1882: 1880: 1871: 1867: 1862: 1857: 1853: 1849: 1845: 1841: 1837: 1833: 1829: 1821: 1813: 1809: 1804: 1799: 1794: 1789: 1785: 1781: 1777: 1769: 1761: 1757: 1752: 1747: 1742: 1737: 1733: 1729: 1725: 1718: 1710: 1706: 1701: 1696: 1692: 1688: 1684: 1680: 1676: 1669: 1661: 1657: 1652: 1647: 1643: 1639: 1635: 1631: 1627: 1620: 1618: 1609: 1605: 1600: 1595: 1591: 1587: 1583: 1579: 1575: 1568: 1566: 1557: 1553: 1548: 1543: 1539: 1535: 1531: 1527: 1523: 1519: 1515: 1508: 1500: 1496: 1491: 1486: 1482: 1478: 1474: 1470: 1466: 1462: 1458: 1450: 1448: 1439: 1435: 1430: 1425: 1421: 1417: 1413: 1409: 1405: 1398: 1390: 1386: 1381: 1376: 1372: 1368: 1364: 1360: 1356: 1349: 1341: 1337: 1332: 1327: 1323: 1319: 1315: 1311: 1307: 1299: 1291: 1287: 1282: 1277: 1273: 1269: 1265: 1261: 1257: 1249: 1241: 1237: 1232: 1227: 1222: 1217: 1213: 1209: 1205: 1198: 1196: 1187: 1183: 1178: 1173: 1169: 1165: 1161: 1157: 1153: 1146: 1144: 1142: 1137: 1130: 1129: 1125: 1121: 1108: 1107: 1103: 1100: 1099: 1095: 1092: 1091: 1087: 1085: 1084: 1080: 1077: 1076: 1072: 1070: 1069: 1065: 1062: 1061: 1057: 1054: 1053: 1049: 1046: 1045: 1041: 1038: 1037: 1033: 1030: 1029: 1025: 1022: 1021: 1017: 1015: 1014: 1010: 1007: 1004: 1001: 998: 996: 995: 991: 988: 987: 983: 980: 979: 975: 973:(castor bean) 972: 971: 967: 964: 963: 959: 956: 955: 951: 949: 947: 943: 939: 936: 935: 931: 928: 927: 923: 920: 919: 915: 912: 911: 907: 905: 904: 900: 897: 896: 892: 889: 888: 884: 882: 880: 876: 874:(house mouse) 873: 872: 868: 865: 864: 860: 857: 854: 851: 850: 846: 843: 842: 838: 836: 835: 831: 828: 825: 822: 819: 816: 813: 810: 807: 804: 803: 799: 797: 794: 791: 790: 786: 783: 782: 781:Gallus gallus 778: 775: 774: 770: 767: 763: 762: 758: 755: 754: 750: 747: 746: 742: 739: 738: 734: 731: 730: 726: 723: 722: 718: 715: 714: 710: 707: 706: 702: 700:(green algae) 699: 698: 694: 691: 690: 686: 683: 682: 678: 675: 674: 670: 667: 666: 662: 659: 658: 654: 651: 650: 646: 644:(thale cress) 643: 642: 638: 635: 634: 630: 627: 626: 622: 621: 619: 617: 613: 603: 601: 597: 593: 592: 587: 586: 581: 580: 575: 571: 567: 563: 559: 555: 551: 547: 538: 536: 532: 528: 524: 520: 516: 512: 507: 503: 499: 495: 494: 483: 481: 480: 475: 474: 469: 468: 462: 457: 452: 441: 438: 434: 430: 426: 422: 418: 414: 410: 406: 402: 392: 390: 386: 382: 378: 374: 370: 366: 362: 358: 355:, Canada and 354: 350: 346: 342: 338: 334: 330: 327: 323: 319: 315: 311: 307: 303: 299: 295: 291: 287: 277: 271: 267: 263: 249: 245: 241: 235: 231: 229: 225: 222:Miscellaneous 220: 216: 214: 210: 205: 201: 186: 183: 179: 175: 165: 161: 157: 151: 147: 143: 141: 137: 132: 128: 124: 119: 115: 112: 108: 104: 101: 97: 93: 90: 88: 84: 79: 75: 73: 69: 65: 61: 57: 54: 48: 44: 41: 37: 32: 28: 23: 2626: 2614: 2521:Nexus format 2516:NeXML format 2511:FASTQ format 2506:FASTA format 2494:File formats 2256:Institutions 1955:. Retrieved 1951: 1942: 1899: 1895: 1835: 1831: 1820: 1783: 1779: 1768: 1731: 1727: 1717: 1682: 1678: 1668: 1633: 1629: 1581: 1577: 1521: 1517: 1507: 1464: 1460: 1411: 1407: 1397: 1362: 1358: 1348: 1313: 1309: 1298: 1263: 1259: 1248: 1211: 1207: 1159: 1155: 1119: 1118: 1104: 1096: 1088: 1081: 1073: 1066: 1058: 1050: 1042: 1034: 1026: 1018: 1011: 1008:(SARS-CoV-2) 992: 984: 976: 968: 965:(Norway rat) 960: 952: 940: 937:(chimpanzee) 932: 924: 918:Oryza sativa 916: 908: 901: 893: 885: 877: 871:Mus musculus 869: 861: 847: 839: 832: 802:Homo sapiens 800: 787: 779: 771: 765: 759: 751: 743: 735: 727: 719: 711: 703: 695: 692:(guinea pig) 687: 679: 671: 663: 655: 647: 639: 631: 623: 611: 609: 591:Mus musculus 589: 583: 579:Homo sapiens 577: 560:, and other 552:function to 544: 527:glioblastoma 493:Homo sapiens 492: 489: 477: 471: 465: 447: 400: 398: 332: 289: 285: 283: 273:Bookmarkable 237:Data release 200:/biogridrest 163:Download URL 42: 2501:CRAM format 2422:(CSIR-IGIB) 789:Glycine max 773:Felis catus 740:(fruit fly) 724:(zebrafish) 721:Danio rerio 636:(honey bee) 461:text mining 345:publication 192:.thebiogrid 182:Web service 170:.thebiogrid 140:Data format 39:Description 2644:Categories 2587:Sequencing 2551:GTF format 2546:GFF format 2541:VCF format 2531:SAM format 2294:(EMBL-EBI) 2220:SOAP suite 2140:VectorBase 2102:BioNumbers 2088:Swiss-Prot 1957:2021-01-26 1734:(3): R22. 1636:: bat026. 1584:: bap026. 1214:(3): R23. 1133:References 1060:Sus scrofa 1002:(SARS-CoV) 926:Ovis aries 858:(MERS-CoV) 657:Bos taurus 600:phenotypes 596:cell lines 572:and other 562:phenotypes 523:proteasome 517:, and the 257:2021-01-01 228:Versioning 154:thebiogrid 106:Laboratory 50:Data types 2414:(ISCB-SC) 2384:(EMBL-AR) 2317:(MPI-CBG) 2058:Databases 1916:1469-896X 1786:(4): 11. 1538:1362-4962 1481:1362-4962 1039:(sorghum) 792:(soybean) 784:(chicken) 519:ubiquitin 515:autophagy 239:frequency 168:downloads 72:Organisms 2616:Category 2486:(RECOMB) 2436:Meetings 2390:(EMBnet) 2240:Server: 2215:SAMtools 2210:PANGOLIN 2173:Software 2152:PHI-base 2144:WormBase 2114:InterPro 1934:33070389 1870:20489023 1812:16762047 1760:12620107 1709:21300700 1660:23674503 1630:Database 1608:20428315 1578:Database 1556:30476227 1499:27980099 1438:18000002 1389:21071413 1340:23203989 1290:25428363 1240:12620108 1186:16381927 1126:and the 1106:Zea mays 1031:(potato) 1023:(tomato) 944:(a type 913:(rabbit) 852:(turkey) 535:COVID-19 506:chemical 454:506,485 437:chemical 413:organism 391:(IMEx). 373:WormBase 341:chemical 306:chemical 275:entities 174:/BioGRID 52:captured 2628:Commons 2463:(InCoB) 2408:(ISCB) 2396:(INSDC) 2378:(ASBCB) 2282:(DBCLS) 2276:(COSBI) 2190:Clustal 2136:FlyBase 2110:Ensembl 2084:UniProt 2066:GenBank 1925:7737760 1861:3983991 1840:Bibcode 1832:Science 1803:1561585 1700:3065694 1651:3653121 1599:2860897 1547:6324058 1490:5210573 1429:2238873 1380:3013707 1331:3531226 1281:4383984 1177:1347471 1120:BioGRID 929:(sheep) 823:(HIV-2) 817:(HIV-1) 805:(human) 766:E. coli 756:(horse) 748:FGSC A4 612:BioGRID 598:and 17 502:protein 401:BioGRID 395:History 377:PomBase 369:FlyBase 353:Ontario 349:Toronto 337:protein 333:BioGRID 329:species 298:protein 290:BioGRID 255: ( 247:Version 149:Website 117:Authors 81:Contact 43:BioGRID 34:Content 20:BioGRID 2469:(CIBB) 2457:(ISMB) 2451:(ECCB) 2428:(JSBi) 2334:(NBIC) 2323:(NCBI) 2311:(JCVI) 2300:(EMBL) 2288:(DDBJ) 2242:ExPASy 2225:TopHat 2205:MUSCLE 2195:EMBOSS 2185:Bowtie 2160:GISAID 2120:, and 2092:TrEMBL 1932:  1922:  1914:  1868:  1858:  1810:  1800:  1758:  1751:153462 1748:  1707:  1697:  1658:  1648:  1606:  1596:  1554:  1544:  1536:  1497:  1487:  1479:  1436:  1426:  1387:  1377:  1338:  1328:  1288:  1278:  1238:  1231:153463 1228:  1184:  1174:  1109:(corn) 676:SC5314 546:CRISPR 533:, and 504:, and 435:data, 357:Dallas 187:Yes - 134:Access 121:Tyers. 2480:(PSB) 2402:(ISB) 2351:(SIB) 2340:(PGC) 2270:(CBD) 2234:Other 2200:HMMER 2180:BLAST 1063:(pig) 946:louse 898:OR74A 881:H37Rv 776:(cat) 684:(dog) 660:(cow) 361:Texas 207:Tools 196:/doku 2162:and 2128:BOLD 2118:KEGG 2094:and 2076:and 1930:PMID 1912:ISSN 1866:PMID 1808:PMID 1756:PMID 1705:PMID 1656:PMID 1634:2013 1604:PMID 1582:2010 1552:PMID 1534:ISSN 1495:PMID 1477:ISSN 1434:PMID 1385:PMID 1336:PMID 1286:PMID 1236:PMID 1182:PMID 890:M129 570:Cas9 554:cell 550:gene 498:gene 399:The 385:CIHR 383:and 284:The 198:.php 194:.org 190:wiki 172:.org 156:.org 1920:PMC 1904:doi 1856:PMC 1848:doi 1836:328 1798:PMC 1788:doi 1746:PMC 1736:doi 1695:PMC 1687:doi 1646:PMC 1638:doi 1594:PMC 1586:doi 1542:PMC 1526:doi 1485:PMC 1469:doi 1424:PMC 1416:doi 1375:PMC 1367:doi 1326:PMC 1318:doi 1276:PMC 1268:doi 1226:PMC 1216:doi 1172:PMC 1164:doi 652:168 482:). 419:at 381:NIH 343:or 320:at 296:of 232:Yes 213:Web 184:URL 2646:: 2445:() 2158:, 2154:, 2150:, 2146:, 2142:, 2138:, 2134:, 2130:, 2116:, 2112:, 2108:, 2104:, 2090:, 2072:, 2068:, 1950:. 1928:. 1918:. 1910:. 1900:30 1898:. 1894:. 1878:^ 1864:. 1854:. 1846:. 1834:. 1830:. 1806:. 1796:. 1782:. 1778:. 1754:. 1744:. 1730:. 1726:. 1703:. 1693:. 1683:27 1681:. 1677:. 1654:. 1644:. 1632:. 1628:. 1616:^ 1602:. 1592:. 1580:. 1576:. 1564:^ 1550:. 1540:. 1532:. 1522:47 1520:. 1516:. 1493:. 1483:. 1475:. 1465:45 1463:. 1459:. 1446:^ 1432:. 1422:. 1412:36 1410:. 1406:. 1383:. 1373:. 1363:39 1361:. 1357:. 1334:. 1324:. 1314:41 1312:. 1308:. 1284:. 1274:. 1264:43 1262:. 1258:. 1234:. 1224:. 1210:. 1206:. 1194:^ 1180:. 1170:. 1160:34 1158:. 1154:. 1140:^ 618:. 602:. 529:, 513:, 500:, 496:) 375:, 371:, 367:, 359:, 351:, 339:, 304:, 98:, 94:, 76:80 58:, 2043:e 2036:t 2029:v 1960:. 1936:. 1906:: 1872:. 1850:: 1842:: 1814:. 1790:: 1784:5 1762:. 1738:: 1732:4 1711:. 1689:: 1662:. 1640:: 1610:. 1588:: 1558:. 1528:: 1501:. 1471:: 1440:. 1418:: 1391:. 1369:: 1342:. 1320:: 1292:. 1270:: 1242:. 1218:: 1212:4 1188:. 1166:: 768:) 764:( 521:- 464:( 288:( 259:) 66:.

Index


Protein Interactions
Genetic Interactions
Post-Translational Modifications
Organisms
Research center
Université de Montréal
Princeton University
Mount Sinai Hospital (Toronto)
Lunenfeld-Tanenbaum Research Institute
Data format
thebiogrid.org
downloads.thebiogrid.org/BioGRID
Web service
wiki.thebiogrid.org/doku.php/biogridrest
Web
Versioning
biological database
protein
genetic interactions
chemical
post-translational modifications
General Repository for Interaction Datasets
Lunenfeld-Tanenbaum Research Institute
Mount Sinai Hospital
model organism
species
protein
chemical
publication

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