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Exon skipping

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140:. This means that, out of the 79 exons that code for dystrophin, one or several in the middle may be removed, without affecting the exons that follow the deletion. This allows for a shorter-than-normal dystrophin protein that maintains a degree of functionality. In Duchenne muscular dystrophy, the genetic mutation is out-of-frame. Out-of-frame mutations cause a premature stop in protein generation - the ribosome is unable to “read” the RNA past the point of initial error - leading to a severely shortened and completely non-functional dystrophin protein. 95:(AON). An antisense oligonucleotide is a synthesized short nucleic acid polymer, typically fifty or fewer base pairs in length that will bind to the mutation site in the pre-messenger RNA, to induce exon skipping. The AON binds to the mutated exon, so that when the gene is then translated from the mature mRNA, it is “skipped” over, thus restoring the disrupted reading frame. This allows for the generation of an internally deleted, but largely functional protein. 254:, usually from blood samples, can be used to determine the precise nature and location of the DMD mutation in the dystrophin gene. It is known that these mutations cluster in areas known as the 'hot spot' regions — primarily in exons 45–53 and to a lesser extent exons 2–20. As the majority of DMD mutations occur in these 'hot spot' regions, a treatment which causes these exons to be skipped could be used to treat up to 50% of DMD patients. 129:
that do not upset the open reading frame, lead to a dystrophin protein that is internally deleted and shorter than normal, but still partially functional. Such mutations are associated with the much milder Becker muscular dystrophy. Mildly affected BMD patients carrying deletions that involve over two thirds of the central rod domain have been described, suggesting that this domain is largely dispensable.
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Dystrophin can maintain a large degree of functionality so long as the essential terminal domains are unaffected, and exon skipping only occurs within the central rod domain. Given these parameters, exon skipping can be used to restore an open reading frame by inducing a deletion of one or several
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within dystrophin create prematurely truncated proteins that are unable to perform their job. Such mutations lead to muscle fiber damage, replacement of muscle tissue by fat and fibrotic tissue, and premature death typically occurring in the early twenties of DMD patients. Comparatively, mutations
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In the case of Duchenne muscular dystrophy, the protein that becomes compromised is dystrophin. The dystrophin protein has two essential functional domains that flank a central rod domain consisting of repetitive and partially dispensable segments. Dystrophin’s function is to maintain muscle fiber
76:. Exons are the sections of DNA that contain the instruction set for generating a protein; they are interspersed with non-coding regions called introns. The introns are later removed before the protein is made, leaving only the coding exon regions. 98:
Some mutations require exon skipping at multiple sites, sometimes adjacent to one another, in order to restore the reading frame. Multiple exon skipping has successfully been carried out using a combination of AONs that target multiple exons.
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when introns are being removed to form mature-mRNA that consists solely of exons. Starting in the late 1990s, scientists realized they could take advantage of this naturally occurring cellular splicing to downplay genetic
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is prematurely truncated, which leads to a non-functioning protein. Successful treatment by way of exon skipping could lead to a mostly functional dystrophin protein, and create a phenotype similar to the less severe
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The goal of exon skipping is to manipulate the splicing pattern so that an out-of-frame mutation becomes an in-frame mutation, thus changing a severe DMD mutation into a less harmful in-frame BMD mutation.
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stability during contraction by linking the extra cellular matrix to the cytoskeleton. Mutations that disrupt the
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Aartsma-Rus A, Fokkema I, Verschuuren J, Ginjaar I, van Deutekom J, van Ommen GJ, den Dunnen JT (March 2009).
286: 17: 587: 543: 538:"FDA grants accelerated approval to first targeted treatment for rare Duchenne muscular dystrophy mutation" 171:(Viltepso), targeting dystrophin exon 53 was approved for medical use in the United States in August 2020. 163:(Vyondys 53) (targeting dystrophin exon 53), was approved in the United States in December 2019. A third 108: 412:"Theoretic applicability of antisense-mediated exon skipping for Duchenne muscular dystrophy mutations" 621:
van Deutekom JC, van Ommen GJ (October 2003). "Advances in Duchenne muscular dystrophy gene therapy".
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exons within the central rod domain, and thus converting a DMD phenotype into a BMD phenotype.
490:"Antisense-mediated exon skipping: a versatile tool with therapeutic and research applications" 304:
Goyenvalle A, Vulin A, Fougerousse F, Leturcq F, Kaplan JC, Garcia L, Danos O (December 2004).
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Form of RNA splicing used to cause cells to "skip" over faulty sections of genetic code
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targeting exon 51 of human dystrophin. Another exon-skipping Morpholino,
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are the genetic instructions for creating a protein, and are composed of
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Harding PL, Fall AM, Honeyman K, Fletcher S, Wilton SD (January 2007).
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Muscular Dystrophy Campaign. N.p., 11 July 2009. Web. 05 Nov. 2012.
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The genetic mutation that leads to Becker muscular dystrophy is an
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used to cause cells to “skip” over faulty or misaligned sections (
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This article incorporates text from this source, which is in the
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This article incorporates text from this source, which is in the
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Exon skipping is being heavily researched for the treatment of
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One exon-skipping drug was approved in 2016, by the US FDA:
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The mechanism behind exon skipping is a mutation specific
287:"Exon Skipping in DMD: What Is It and Whom Can It Help?" 620: 487: 661: 103:As a treatment for Duchenne muscular dystrophy 574: 297: 530: 488:Aartsma-Rus A, van Ommen GJ (October 2007). 464:What Is Exon Skipping and How Does It Work? 405: 403: 401: 513: 483: 481: 479: 427: 381: 329: 398: 14: 662: 476: 459: 457: 455: 359: 357: 280: 278: 552:from the original on 13 December 2019 175:exon skipping drugs approved for DMD 60:Exon skipping is used to restore the 284: 548:(Press release). 12 December 2019. 452: 354: 275: 24: 111:(DMD), where the muscular protein 25: 681: 602: 562: 592:(Press release). 12 August 2020 614: 13: 1: 269: 79:Splicing naturally occurs in 588:Food and Drug Administration 544:Food and Drug Administration 49: 7: 257: 109:Duchenne muscular dystrophy 10: 686: 53: 285:Wahl M (1 October 2011). 165:antisense oligonucleotide 118:Becker muscular dystrophy 93:antisense oligonucleotide 623:Nature Reviews. Genetics 88:into less harmful ones. 331:10.1126/science.1104297 383:10.1038/sj.mt.6300006 291:Quest Magazine Online 157:Sarepta Therapeutics 322:2004Sci...306.1796G 176: 506:10.1261/rna.653607 469:2014-12-08 at the 429:10.1002/humu.20918 174: 126:open reading frame 370:Molecular Therapy 264:Antisense therapy 249: 248: 138:in-frame deletion 32:molecular biology 16:(Redirected from 677: 655: 654: 618: 612: 606: 605: 601: 599: 597: 578: 572: 566: 565: 561: 559: 557: 534: 528: 527: 517: 485: 474: 461: 450: 449: 431: 407: 396: 395: 385: 361: 352: 351: 333: 316:(5702): 1796–9. 301: 295: 294: 282: 189:UD FDA approval 177: 173: 21: 685: 684: 680: 679: 678: 676: 675: 674: 660: 659: 658: 635:10.1038/nrg1180 619: 615: 603: 595: 593: 580: 579: 575: 563: 555: 553: 536: 535: 531: 500:(10): 1609–24. 486: 477: 471:Wayback Machine 462: 453: 408: 399: 362: 355: 302: 298: 283: 276: 272: 260: 252:Genetic testing 203:September 2016 151:(ExonDys51), a 105: 64:within a gene. 58: 52: 28: 23: 22: 15: 12: 11: 5: 683: 673: 672: 657: 656: 629:(10): 774–83. 613: 573: 529: 475: 451: 416:Human Mutation 397: 353: 296: 273: 271: 268: 267: 266: 259: 256: 247: 246: 243: 240: 237: 233: 232: 229: 226: 223: 219: 218: 217:December 2019 215: 212: 209: 205: 204: 201: 198: 195: 191: 190: 187: 184: 181: 104: 101: 51: 48: 26: 9: 6: 4: 3: 2: 682: 671: 668: 667: 665: 652: 648: 644: 640: 636: 632: 628: 624: 617: 610: 609:public domain 591: 589: 583: 577: 570: 569:public domain 551: 547: 545: 539: 533: 525: 521: 516: 511: 507: 503: 499: 495: 491: 484: 482: 480: 472: 468: 465: 460: 458: 456: 447: 443: 439: 435: 430: 425: 421: 417: 413: 406: 404: 402: 393: 389: 384: 379: 376:(1): 157–66. 375: 371: 367: 360: 358: 349: 345: 341: 337: 332: 327: 323: 319: 315: 311: 307: 300: 292: 288: 281: 279: 274: 265: 262: 261: 255: 253: 244: 241: 238: 235: 234: 230: 227: 224: 221: 220: 216: 213: 210: 207: 206: 202: 199: 196: 193: 192: 188: 185: 182: 179: 178: 172: 170: 166: 162: 158: 154: 150: 145: 141: 139: 134: 130: 127: 121: 119: 114: 110: 100: 96: 94: 89: 87: 82: 77: 75: 71: 67: 63: 62:reading frame 57: 47: 45: 41: 38:is a form of 37: 36:exon skipping 33: 19: 18:Exon-skipping 626: 622: 616: 594:. Retrieved 585: 576: 554:. Retrieved 541: 532: 497: 493: 422:(3): 293–9. 419: 415: 373: 369: 313: 309: 299: 290: 250: 231:August 2020 146: 142: 135: 131: 122: 106: 97: 90: 78: 59: 56:RNA splicing 40:RNA splicing 35: 29: 556:12 December 245:March 2021 222:viltolarsen 169:viltolarsen 155:oligo from 270:References 236:casimerson 208:golodirsen 194:eteplirsen 161:golodirsen 153:Morpholino 149:eteplirsen 113:dystrophin 54:See also: 651:207859539 596:12 August 228:NS Pharma 86:mutations 50:Mechanism 670:Genetics 664:Category 643:14526374 550:Archived 524:17684229 467:Archived 446:45979175 438:19156838 392:17164787 340:15528407 258:See also 81:pre-mRNA 515:1986821 348:9359783 318:Bibcode 310:Science 242:Sarepta 214:Sarepta 200:Sarepta 186:company 120:(BMD). 70:introns 649:  641:  522:  512:  444:  436:  390:  346:  338:  647:S2CID 590:(FDA) 586:U.S. 546:(FDA) 542:U.S. 442:S2CID 344:S2CID 74:exons 66:Genes 44:exons 639:PMID 598:2020 558:2019 520:PMID 434:PMID 388:PMID 336:PMID 183:exon 180:drug 72:and 631:doi 510:PMC 502:doi 494:RNA 424:doi 378:doi 326:doi 314:306 30:In 666:: 645:. 637:. 625:. 584:. 540:. 518:. 508:. 498:13 496:. 492:. 478:^ 454:^ 440:. 432:. 420:30 418:. 414:. 400:^ 386:. 374:15 372:. 368:. 356:^ 342:. 334:. 324:. 312:. 308:. 289:. 277:^ 239:45 225:53 211:53 197:51 167:, 34:, 653:. 633:: 627:4 611:. 600:. 571:. 560:. 526:. 504:: 448:. 426:: 394:. 380:: 350:. 328:: 320:: 293:. 20:)

Index

Exon-skipping
molecular biology
RNA splicing
exons
RNA splicing
reading frame
Genes
introns
exons
pre-mRNA
mutations
antisense oligonucleotide
Duchenne muscular dystrophy
dystrophin
Becker muscular dystrophy
open reading frame
in-frame deletion
eteplirsen
Morpholino
Sarepta Therapeutics
golodirsen
antisense oligonucleotide
viltolarsen
Genetic testing
Antisense therapy


"Exon Skipping in DMD: What Is It and Whom Can It Help?"
"Rescue of dystrophic muscle through U7 snRNA-mediated exon skipping"
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