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Bacterial outer membrane

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Bacterial outer membrane proteins typically have a unique beta barrel structure that spans the membrane. The beta barrels fold to expose a hydrophobic surface before their insertion into the outer membrane. Beta barrels vary in sequence and size that ranges from 8 to 36 beta strands. A subset of OMPs
500:. Lipid A is very pathogenic and not immunogenic. However, the polysaccharide component is very immunogenic, but not pathogenic, causing an aggressive response by the immune system. The sufferer will have a high temperature and respiration rate and a low blood pressure. This may lead to 476:
LptC is required for the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane. LptE forms a complex with LptD, which is involved in the assembly of LPS in the outer leaflet of the outer membrane and is essential for envelope biogenesis.
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have a perisplasmic or an extracellular link to their beta barrel structure. An outer membrane protein is translocated across the inner membrane through ‘’Sec’’ machinery, and finally inserted to the outer membrane by the barrel assembly machinery complex.
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Knowles, Timothy J.; Scott-Tucker, Anthony; Overduin, Michael; Henderson, Ian R. (March 2009). "Membrane protein architects: the role of the BAM complex in outer membrane protein assembly".
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with key roles associated with bacterial cell structure and morphology; cell membrane homeostasis; the uptake of nutrients; protection of the cell from toxins including antibiotics; and
792:"The activity of a putative polyisoprenol-linked sugar translocase (Wzx) involved in Escherichia coli O antigen assembly is independent of the chemical structure of the O repeat" 422:
of the outer membrane requires that the individual components are transported from the site of synthesis to their final destination outside the inner membrane by crossing both
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blocks the LPS assembly pathway and results in very similar outer membrane biogenesis defects. Moreover, the location of at least one of these five proteins in every
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Polissi A, Georgopoulos C (June 1996). "Mutational analysis and properties of the msbA gene of Escherichia coli, coding for an essential ABC family transporter".
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MsbA that flips the lipid A-core moiety from the inner leaflet to the outer leaflet of the inner membrane. O-antigen repeat units are then polymerised in the
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face of the inner membrane and are separately exported via two independent transport systems, namely, the O-antigen transporter Wzx (RfbX) and the
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transport machinery is composed of LptA, LptB, LptC, LptD, LptE. This supported by the fact that depletion of any one of these
1181:"Identification of an outer membrane protein required for the transport of lipopolysaccharide to the bacterial cell surface" 289: 144: 1749: 1516: 1256: 1877: 505: 966:"Function of Escherichia coli MsbA, an essential ABC family transporter, in lipid A and phospholipid biosynthesis" 1506: 1433: 1122:"Identification of a protein complex that assembles lipopolysaccharide in the outer membrane of Escherichia coli" 332:- among other things, the outer leaflet of the outer membrane of many gram-negative bacteria includes a complex 1630: 1361: 536: 277: 132: 521: 430:
compartments. The machinery and the energy source that drive this process are not yet fully understood. The
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Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A (July 2008).
1471: 504:, which may be fatal. The bacterial outer membrane is physiologically shed as the bounding membrane of 273: 128: 512:, implicated in translocation of gram-negative microbial biochemical signals to host or target cells. 1882: 1872: 1823: 408: 1548: 1511: 1307: 1701: 1620: 1599: 1249: 349: 306: 664:"Bacterial Outer Membrane Proteins Are Targeted to the Bam Complex by Two Parallel Mechanisms" 1741: 1383: 1032: 386: 833:"An O-antigen processing function for Wzx (RfbX): a promising candidate for O-unit flippase" 1581: 1456: 1439: 1277: 1192: 1133: 389:
and lipoproteins. The transmembrane proteins form channels or pores in the membrane called
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Feldman MF, Marolda CL, Monteiro MA, Perry MB, Parodi AJ, Valvano MA (December 1999).
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suggests a model for how the LPS assembly pathway is organised and ordered in space.
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Wu T, McCandlish AC, Gronenberg LS, Chng SS, Silhavy TJ, Kahne D (August 2006).
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van der Ley P, Heckels JE, Virji M, Hoogerhout P, Poolman JT (September 1991).
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formation. There are a number of outer membrane proteins that are specifically
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The outer membranes of a bacterium can contain a huge number of proteins. In
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The composition of the outer membrane is distinct from that of the inner
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Zhou Z, White KA, Polissi A, Georgopoulos C, Raetz CR (May 1998).
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Outer membrane proteins consist of two major classes of protein -
1722: 1686: 1322: 609: 486: 466: 431: 375: 1070: 1768: 1523: 612:"Topology of outer membrane porins in pathogenic Neisseria spp" 455: 284: 139: 1696: 531: 497: 963: 1850: 1836: 789: 246: 201: 177: 101: 67: 55: 1178: 1119: 741:
Sun J, Rutherford ST, Silhavy TJ, Huang KC (April 2022).
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Bos MP, Tefsen B, Geurtsen J, Tommassen J (June 2004).
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This article incorporates text from the public domain
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This article incorporates text from the public domain
882:"An Escherichia coli mutant defective in lipid export" 400:
for example there are around 500,000 in the membrane.
743:"Physical properties of the bacterial outer membrane" 661: 920: 454:and ligated to the lipid A-core moiety by the WaaL 321:, and an outer membrane (OM) that encapsulates the 879: 508:in cultures, as well as in animal tissues at the 1864: 1066: 1064: 1062: 1060: 317:- an inner membrane (IM) that encapsulates the 16:Plasma membrane found in gram-negative bacteria 1014: 880:Doerrler WT, Reedy MC, Raetz CR (April 2001). 662:Wang X, Peterson JH, Bernstein HD (May 2021). 1250: 830: 489:, part of the lipopolysaccharide, enters the 1172: 1113: 1057: 1008: 957: 873: 783: 560: 1264: 1257: 1243: 914: 824: 603: 361: 1214: 1204: 1155: 1145: 1096: 1040: 991: 981: 897: 856: 807: 766: 687: 635: 586: 493:it causes a toxic reaction by activating 37:Lipopolysaccharide-assembly, LptC-related 1033:10.1146/annurev.biochem.71.110601.135414 831:Liu D, Cole RA, Reeves PR (April 1996). 561:Yeow J, Luo M, Chng SS (December 2023). 480: 393:, and actively pumping efflux channels. 30:Structure of gram-negative cell envelope 25: 1865: 704: 657: 655: 444:ATP binding cassette (ABC) transporter 1238: 736: 734: 1819: 438:repeat units are synthesized at the 652: 554: 374:including adhesins, exotoxins, and 13: 935:10.1111/j.1365-2958.1996.tb02642.x 731: 309:. Gram-negative bacteria form two 14: 1894: 1818: 1809: 1808: 1507:Bacterial cellular morphologies 1017:"Lipopolysaccharide endotoxins" 849:10.1128/jb.178.7.2102-2107.1996 628:10.1128/IAI.59.9.2963-2971.1991 340:- and in some bacteria such as 336:whose lipid portion acts as an 1015:Raetz CR, Whitfield C (2002). 537:Outer membrane efflux proteins 1: 547: 413: 241:Available protein structures: 96:Available protein structures: 1185:Proc. Natl. Acad. Sci. U.S.A 1126:Proc. Natl. Acad. Sci. U.S.A 542:Outer mitochondrial membrane 366:Outer membrane proteins are 358:can be found in this layer. 7: 713:Nature Reviews Microbiology 515: 344:it is linked to the cell's 159:Lipopolysaccharide-assembly 10: 1899: 1848: 1834: 1750:Bacteria (classifications) 1472:Primary nutritional groups 759:10.1038/s41579-021-00638-0 579:10.1038/s41467-023-44144-8 406: 18: 1804: 1735: 1715: 1667: 1556: 1547: 1499: 1392: 1330: 1316: 1276: 522:Host–pathogen interaction 409:Phosphate-selective porin 330:cytoplasmic cell membrane 283: 263: 245: 240: 236: 224: 212: 200: 188: 176: 168: 163: 158: 138: 118: 100: 95: 91: 79: 66: 54: 46: 41: 36: 1878:Prokaryotic cell anatomy 1626:Bacterial outer membrane 983:10.1074/jbc.273.20.12466 809:10.1074/jbc.274.49.35129 303:bacterial outer membrane 19:Not to be confused with 1206:10.1073/pnas.0402340101 1147:10.1073/pnas.0604744103 510:host–pathogen interface 506:outer membrane vesicles 362:Outer membrane proteins 1621:Gram-negative bacteria 1600:Gram-positive bacteria 899:10.1074/jbc.C100091200 616:Infection and Immunity 387:transmembrane proteins 307:gram-negative bacteria 31: 1476:Substrate preference 680:10.1128/mBio.00597-21 481:Clinical significance 434:-core moiety and the 407:Further information: 29: 1457:Microbial metabolism 471:cellular compartment 1707:Non-motile bacteria 1303:Pathogenic bacteria 1197:2004PNAS..101.9417B 1138:2006PNAS..10311754W 1089:10.1128/JB.00270-08 725:10.1038/nrmicro2069 350:Braun's lipoprotein 1636:Lipopolysaccharide 1021:Annu. Rev. Biochem 495:toll like receptor 491:circulatory system 334:lipopolysaccharide 32: 1832: 1831: 1731: 1730: 1677:Bacterial capsule 1643:Periplasmic space 1610:Lipoteichoic acid 1495: 1494: 1467:Microbial ecology 1462:Nitrogen fixation 747:Nat Rev Microbiol 380:virulence-related 372:virulence factors 368:membrane proteins 299: 298: 295: 294: 290:structure summary 154: 153: 150: 149: 145:structure summary 21:Bacterial capsule 1890: 1883:Protein families 1873:Membrane biology 1822: 1821: 1812: 1811: 1760:Former groupings 1554: 1553: 1405:Human microbiome 1328: 1327: 1259: 1252: 1245: 1236: 1235: 1229: 1228: 1218: 1208: 1176: 1170: 1169: 1159: 1149: 1117: 1111: 1110: 1100: 1068: 1055: 1054: 1044: 1012: 1006: 1005: 995: 985: 976:(20): 12466–75. 961: 955: 954: 918: 912: 911: 901: 877: 871: 870: 860: 828: 822: 821: 811: 802:(49): 35129–38. 787: 781: 780: 770: 738: 729: 728: 708: 702: 701: 691: 659: 650: 649: 639: 607: 601: 600: 590: 558: 238: 237: 156: 155: 93: 92: 34: 33: 1898: 1897: 1893: 1892: 1891: 1889: 1888: 1887: 1863: 1862: 1861: 1847: 1833: 1828: 1800: 1755:Bacterial phyla 1739: 1727: 1711: 1669: 1663: 1654:Arabinogalactan 1559: 1543: 1491: 1388: 1332: 1320: 1312: 1298:Lysogenic cycle 1279: 1272: 1263: 1233: 1232: 1191:(25): 9417–22. 1177: 1173: 1132:(31): 11754–9. 1118: 1114: 1069: 1058: 1013: 1009: 962: 958: 919: 915: 892:(15): 11461–4. 878: 874: 829: 825: 788: 784: 739: 732: 709: 705: 660: 653: 608: 604: 559: 555: 550: 518: 502:endotoxic shock 483: 416: 411: 364: 214:OPM superfamily 24: 17: 12: 11: 5: 1896: 1886: 1885: 1880: 1875: 1830: 1829: 1827: 1826: 1816: 1805: 1802: 1801: 1799: 1798: 1797: 1796: 1791: 1786: 1781: 1771: 1766: 1757: 1752: 1746: 1744: 1733: 1732: 1729: 1728: 1726: 1725: 1719: 1717: 1713: 1712: 1710: 1709: 1704: 1699: 1694: 1689: 1684: 1679: 1673: 1671: 1665: 1664: 1662: 1661: 1656: 1645: 1640: 1639: 1638: 1633: 1617: 1612: 1607: 1596: 1595: 1594: 1589: 1584: 1570: 1564: 1562: 1551: 1545: 1544: 1542: 1541: 1536: 1531: 1526: 1521: 1520: 1519: 1514: 1512:cell structure 1503: 1501: 1497: 1496: 1493: 1492: 1490: 1489: 1488: 1487: 1485:Saccharophilic 1482: 1474: 1469: 1464: 1459: 1454: 1453: 1452: 1447: 1442: 1437: 1427: 1422: 1417: 1412: 1402: 1396: 1394: 1390: 1389: 1387: 1386: 1381: 1376: 1374:Microaerophile 1371: 1370: 1369: 1364: 1354: 1353: 1352: 1347: 1336: 1334: 1325: 1314: 1313: 1311: 1310: 1305: 1300: 1295: 1290: 1284: 1282: 1274: 1273: 1262: 1261: 1254: 1247: 1239: 1231: 1230: 1171: 1112: 1083:(13): 4460–9. 1056: 1007: 956: 929:(6): 1221–33. 923:Mol. Microbiol 913: 872: 823: 782: 753:(4): 236–248. 730: 719:(3): 206–214. 703: 651: 622:(9): 2963–71. 602: 552: 551: 549: 546: 545: 544: 539: 534: 529: 524: 517: 514: 482: 479: 415: 412: 363: 360: 315:cell envelopes 311:lipid bilayers 297: 296: 293: 292: 287: 281: 280: 267: 261: 260: 250: 243: 242: 234: 233: 228: 222: 221: 216: 210: 209: 204: 198: 197: 192: 186: 185: 180: 174: 173: 170: 166: 165: 161: 160: 152: 151: 148: 147: 142: 136: 135: 122: 116: 115: 105: 98: 97: 89: 88: 83: 77: 76: 71: 64: 63: 58: 52: 51: 48: 44: 43: 39: 38: 15: 9: 6: 4: 3: 2: 1895: 1884: 1881: 1879: 1876: 1874: 1871: 1870: 1868: 1860: 1856: 1852: 1846: 1842: 1838: 1825: 1817: 1815: 1807: 1806: 1803: 1795: 1792: 1790: 1787: 1785: 1782: 1780: 1777: 1776: 1775: 1772: 1770: 1767: 1765: 1764:Schizomycetes 1761: 1758: 1756: 1753: 1751: 1748: 1747: 1745: 1743: 1738: 1734: 1724: 1721: 1720: 1718: 1714: 1708: 1705: 1703: 1700: 1698: 1695: 1693: 1690: 1688: 1685: 1683: 1680: 1678: 1675: 1674: 1672: 1666: 1660: 1657: 1655: 1652: 1650: 1646: 1644: 1641: 1637: 1634: 1632: 1629: 1628: 1627: 1624: 1622: 1618: 1616: 1613: 1611: 1608: 1606: 1605:Teichoic acid 1603: 1601: 1597: 1593: 1590: 1588: 1585: 1583: 1580: 1579: 1578: 1577:Peptidoglycan 1574: 1571: 1569: 1568:Cell membrane 1566: 1565: 1563: 1561: 1555: 1552: 1550: 1546: 1540: 1537: 1535: 1532: 1530: 1527: 1525: 1522: 1518: 1515: 1513: 1510: 1509: 1508: 1505: 1504: 1502: 1498: 1486: 1483: 1481: 1478: 1477: 1475: 1473: 1470: 1468: 1465: 1463: 1460: 1458: 1455: 1451: 1448: 1446: 1443: 1441: 1438: 1435: 1431: 1428: 1426: 1423: 1421: 1418: 1416: 1413: 1411: 1408: 1407: 1406: 1403: 1401: 1398: 1397: 1395: 1391: 1385: 1382: 1380: 1377: 1375: 1372: 1368: 1365: 1363: 1360: 1359: 1358: 1355: 1351: 1348: 1346: 1343: 1342: 1341: 1338: 1337: 1335: 1329: 1326: 1324: 1319: 1315: 1309: 1306: 1304: 1301: 1299: 1296: 1294: 1291: 1289: 1286: 1285: 1283: 1281: 1275: 1271: 1267: 1260: 1255: 1253: 1248: 1246: 1241: 1240: 1237: 1226: 1222: 1217: 1212: 1207: 1202: 1198: 1194: 1190: 1186: 1182: 1175: 1167: 1163: 1158: 1153: 1148: 1143: 1139: 1135: 1131: 1127: 1123: 1116: 1108: 1104: 1099: 1094: 1090: 1086: 1082: 1078: 1074: 1067: 1065: 1063: 1061: 1052: 1048: 1043: 1038: 1034: 1030: 1026: 1022: 1018: 1011: 1003: 999: 994: 989: 984: 979: 975: 971: 970:J. Biol. Chem 967: 960: 952: 948: 944: 940: 936: 932: 928: 924: 917: 909: 905: 900: 895: 891: 887: 886:J. Biol. Chem 883: 876: 868: 864: 859: 854: 850: 846: 843:(7): 2102–7. 842: 838: 834: 827: 819: 815: 810: 805: 801: 797: 796:J. Biol. Chem 793: 786: 778: 774: 769: 764: 760: 756: 752: 748: 744: 737: 735: 726: 722: 718: 714: 707: 699: 695: 690: 685: 681: 677: 673: 669: 665: 658: 656: 647: 643: 638: 633: 629: 625: 621: 617: 613: 606: 598: 594: 589: 584: 580: 576: 572: 568: 564: 557: 553: 543: 540: 538: 535: 533: 530: 528: 525: 523: 520: 519: 513: 511: 507: 503: 499: 496: 492: 488: 478: 474: 472: 468: 464: 459: 457: 453: 449: 445: 441: 437: 433: 429: 425: 421: 410: 405: 401: 399: 394: 392: 388: 383: 381: 377: 373: 369: 359: 357: 353: 351: 347: 346:peptidoglycan 343: 339: 335: 331: 326: 324: 320: 316: 312: 308: 304: 291: 288: 286: 282: 279: 275: 271: 268: 266: 262: 258: 254: 251: 248: 244: 239: 235: 232: 229: 227: 223: 220: 217: 215: 211: 208: 205: 203: 199: 196: 193: 191: 187: 184: 181: 179: 175: 171: 167: 162: 157: 146: 143: 141: 137: 134: 130: 126: 123: 121: 117: 113: 109: 106: 103: 99: 94: 90: 87: 84: 82: 78: 75: 72: 69: 65: 62: 59: 57: 53: 49: 45: 40: 35: 28: 22: 1794:Mendosicutes 1779:Gracilicutes 1759: 1659:Mycolic acid 1649:Mycobacteria 1647: 1625: 1619: 1598: 1534:Coccobacilli 1434:in pregnancy 1400:Extremophile 1384:Aerotolerant 1318:Biochemistry 1280:microbiology 1266:Microbiology 1188: 1184: 1174: 1129: 1125: 1115: 1080: 1077:J. Bacteriol 1076: 1024: 1020: 1010: 973: 969: 959: 926: 922: 916: 889: 885: 875: 840: 837:J. Bacteriol 836: 826: 799: 795: 785: 750: 746: 716: 712: 706: 671: 667: 619: 615: 605: 570: 566: 556: 484: 475: 460: 417: 402: 397: 395: 384: 365: 354: 341: 327: 305:is found in 302: 300: 1682:Slime layer 1362:Facultative 1350:Facultative 1027:: 635–700. 993:2434/611267 573:(1): 8285. 450:by the Wzy 440:cytoplasmic 428:hydrophobic 424:hydrophilic 226:OPM protein 164:Identifiers 42:Identifiers 1867:Categories 1789:Mollicutes 1784:Firmicutes 1774:Prokaryota 1692:Glycocalyx 1517:plasticity 1480:Lipophilic 1333:preference 1308:Resistance 567:Nat Commun 548:References 527:Maltoporin 452:polymerase 420:biogenesis 414:Biogenesis 253:structures 108:structures 1859:IPR010664 1845:IPR007485 1742:evolution 1716:Composite 1615:Endospore 1573:Cell wall 1549:Structure 1440:Placental 1379:Nanaerobe 1357:Anaerobic 1288:Infection 448:periplasm 436:O-antigen 338:endotoxin 323:periplasm 319:cytoplasm 313:in their 195:IPR007485 86:IPR010664 1855:InterPro 1841:InterPro 1814:Category 1737:Taxonomy 1670:envelope 1560:envelope 1450:Salivary 1367:Obligate 1345:Obligate 1293:Exotoxin 1270:Bacteria 1225:15192148 1166:16861298 1107:18424520 1051:12045108 951:26807796 908:11278265 818:10574995 777:34732874 698:33947759 597:38092770 588:10719372 516:See also 467:proteins 270:RCSB PDB 190:InterPro 125:RCSB PDB 81:InterPro 1824:Commons 1723:Biofilm 1702:Fimbria 1687:S-layer 1668:Outside 1529:Bacilli 1445:Uterine 1430:Vaginal 1340:Aerobic 1323:ecology 1278:Medical 1193:Bibcode 1157:1544242 1134:Bibcode 1098:2446812 1042:2569852 1002:9575204 943:8809774 867:8606190 768:8934262 689:8262991 646:1652557 487:lipid A 432:lipid A 398:E. Coli 376:biofilm 342:E. coli 183:PF04390 61:PF06835 1769:Monera 1539:Spiral 1331:Oxygen 1223:  1216:438991 1213:  1164:  1154:  1105:  1095:  1049:  1039:  1000:  949:  941:  906:  865:  858:177911 855:  816:  775:  765:  696:  686:  644:  637:258120 634:  595:  585:  456:ligase 391:porins 356:Porins 285:PDBsum 259:  249:  207:1.B.42 169:Symbol 140:PDBsum 114:  104:  74:CL0259 47:Symbol 1697:Pilus 1651:only: 1631:Porin 1623:only: 1602:only: 1524:Cocci 1500:Shape 1420:Mouth 1393:Other 947:S2CID 674:(3). 532:OMPdb 498:TLR 4 1853:and 1851:Pfam 1839:and 1837:Pfam 1740:and 1558:Cell 1425:Skin 1415:Lung 1321:and 1221:PMID 1162:PMID 1103:PMID 1047:PMID 998:PMID 939:PMID 904:PMID 863:PMID 814:PMID 773:PMID 694:PMID 668:mBio 642:PMID 593:PMID 461:The 426:and 418:The 301:The 278:PDBj 274:PDBe 257:ECOD 247:Pfam 231:4q35 202:TCDB 178:Pfam 172:LptE 133:PDBj 129:PDBe 112:ECOD 102:Pfam 70:clan 68:Pfam 56:Pfam 50:LptC 1592:DAP 1587:NAG 1582:NAM 1410:Gut 1211:PMC 1201:doi 1189:101 1152:PMC 1142:doi 1130:103 1093:PMC 1085:doi 1081:190 1037:PMC 1029:doi 988:hdl 978:doi 974:273 931:doi 894:doi 890:276 853:PMC 845:doi 841:178 804:doi 800:274 763:PMC 755:doi 721:doi 684:PMC 676:doi 632:PMC 624:doi 583:PMC 575:doi 485:If 463:LPS 348:by 325:. 265:PDB 219:412 120:PDB 1869:: 1857:: 1843:: 1762:: 1575:: 1268:: 1219:. 1209:. 1199:. 1187:. 1183:. 1160:. 1150:. 1140:. 1128:. 1124:. 1101:. 1091:. 1079:. 1075:. 1059:^ 1045:. 1035:. 1025:71 1023:. 1019:. 996:. 986:. 972:. 968:. 945:. 937:. 927:20 925:. 902:. 888:. 884:. 861:. 851:. 839:. 835:. 812:. 798:. 794:. 771:. 761:. 751:20 749:. 745:. 733:^ 715:. 692:. 682:. 672:12 670:. 666:. 654:^ 640:. 630:. 620:59 618:. 614:. 591:. 581:. 571:14 569:. 565:. 458:. 382:. 352:. 276:; 272:; 255:/ 131:; 127:; 110:/ 1436:) 1432:( 1258:e 1251:t 1244:v 1227:. 1203:: 1195:: 1168:. 1144:: 1136:: 1109:. 1087:: 1053:. 1031:: 1004:. 990:: 980:: 953:. 933:: 910:. 896:: 869:. 847:: 820:. 806:: 779:. 757:: 727:. 723:: 717:7 700:. 678:: 648:. 626:: 599:. 577:: 23:.

Index

Bacterial capsule

Pfam
PF06835
Pfam
CL0259
InterPro
IPR010664
Pfam
structures
ECOD
PDB
RCSB PDB
PDBe
PDBj
PDBsum
structure summary
Pfam
PF04390
InterPro
IPR007485
TCDB
1.B.42
OPM superfamily
412
OPM protein
4q35
Pfam
structures
ECOD

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