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Analytical profile index

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128: 32: 73: 322:, usually related to the fermentation of carbohydrate or catabolism of proteins or amino acids by the inoculated organisms. A bacterial suspension is used to rehydrate each of the wells and the strips are incubated. During incubation, metabolism produces color changes that are either spontaneous or revealed by the addition of reagents. For example, when carbohydrates are fermented, the 243: 379:
system is a widely used biochemical test system designed for the rapid identification of Gram-negative bacteria. It specifically targets two groups: Enterobacteriaceae (API 20E) and non-Enterobacteriaceae (API 20NE). This system is particularly useful in clinical microbiology and environmental
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within the well decreases and that is indicated by a change in the color of the pH indicator. All test results are compiled to obtain a profile number, which is then compared with profile numbers in a commercial codebook (or online) to determine the identification of the bacterial species.
343:, or they use a different cytochrome enzyme for transferring electrons to oxygen. If the culture is determined to be oxidase-positive, alternative tests must be carried out to correctly identify the bacterial species. API-20E is specific for differentiating between members of the 713: 529: 405:
After inoculation, the strip is incubated for a period, usually 18-24 hours, at a specified temperature (often 35-37°C). During incubation, the bacteria interact with the substrates, leading to visible color changes if the reactions
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After incubation, the results are interpreted by observing the color changes in each tube, which are indicative of positive or negative reactions. The pattern of reactions is compared to a reference database to identify the
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To perform the test, the microtubes are rehydrated with a bacterial suspension. Each microtube is designed to detect specific enzymatic activities or carbohydrate fermentations characteristic of the bacteria being
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http://patft.uspto.gov/netacgi/nph-Parser?Sect1=PTO1&Sect2=HITOFF&d=PALL&p=1&u=%2Fnetahtml%2FPTO%2Fsrchnum.htm&r=1&f=G&l=50&s1=3936356.PN.&OS=PN/3936356&RS=PN/3936356
541: 286:, are increasingly used in the identification of bacterial species and strains. These newer methods can be used to complement or even replace the use of API testing in clinical settings. 717:
API System: a Multitube Micromethod for Identification of Enterobacteriaceae, P. B. Smith, K. M. Tomfohrde, D. L. Rhoden, and A. BalowsCenter for Disease Control, Atlanta, Georgia 30333
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Each reaction is scored numerically, and the cumulative score forms a profile number, which is then used to identify the organism through a database or identification software.
747: 299: 306:. The API range introduced a standardized and miniaturized version of existing techniques, which were considered complicated to perform and difficult to read. 318:. API test strips consist of wells containing dehydrated substrates such as the redox substrates, electrogenic substrates and luminogenic substrates to detect 476:
The system is designed for specific groups of bacteria (Gram-negative) and may not be suitable for identifying Gram-positive bacteria or other microorganisms.
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The system consists of a plastic strip containing 20 small reaction tubes (microtubes), each containing different dehydrated substrates.
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API 20E is commonly used in hospital laboratories for identifying pathogens in clinical samples such as urine, blood, or wound swabs.
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Before starting a test, one must confirm the cultured bacteria are Enterobacteriaceae, this is done by a quick oxidase test for
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API 20NE is particularly useful for identifying non-Enterobacteriaceae species in environmental samples, such as water or soil.
1226: 612: 339:. Enterobacteriaceae are typically oxidase negative, meaning they either do not use oxygen as an electron acceptor in the 178: 91: 83: 1040: 229: 211: 160: 109: 59: 1289: 1194: 1050: 688: 1055: 1010: 1102: 876: 149: 1030: 592: 51: 463:
The system provides standardized procedures and results, ensuring consistency across different laboratories.
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The process is straightforward, making it accessible to laboratories without specialized equipment.
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Some results can be ambiguous, requiring experienced personnel or additional confirmatory tests.
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Accurate identification depends on the quality and comprehensiveness of the reference database.
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bacteria. It can only be used to identify known species from an index. The data obtained are
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based on biochemical tests. The system was developed to accelerate the speed of identifying
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The system allows for the rapid identification of bacteria, often within 24 hours.
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studies for identifying bacteria based on their biochemical activities.
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The analytical profile index (API) was invented in the 1970s in the
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API 20NE Detection system after 24 hours incubation.
712:United States Patent Office, Patent Number 3936356 628:Holmes, B; Willcox, W R; Lapage, S P (1978-01-01). 627: 302:. The API test system is currently manufactured by 152:. Unsourced material may be challenged and removed. 351:. Another API system, API-Staph, is specific for 1271: 16:Microbiological method for rapid identification 741: 60:Learn how and when to remove these messages 748: 734: 590: 565: 661: 230:Learn how and when to remove this message 212:Learn how and when to remove this message 110:Learn how and when to remove this message 241: 314:Identification is only possible with a 1272: 591:Octavia, Sophie; Lan, Ruiting (2014). 729: 683: 681: 150:adding citations to reliable sources 121: 66: 25: 1041:Oxidative/fermentation glucose test 13: 706: 566:Tankeshwar, Acharya (2024-02-28). 82:tone or style may not reflect the 14: 1306: 1167:Antibiotic susceptibility testing 974:biochemical and immunologic tests 678: 41:This article has multiple issues. 1285:Biochemistry detection reactions 1195:Minimum inhibitory concentration 887:Manual testing: basic techniques 367:species, and related organisms. 126: 92:guide to writing better articles 71: 30: 593:"The Family Enterobacteriaceae" 423: 383: 137:needs additional citations for 49:or discuss these issues on the 1103:Novobiocin susceptibility test 1093:Bacitracin susceptibility test 621: 584: 559: 534: 523: 499: 467: 309: 1: 986:Amino acid decarboxylase test 634:Journal of Clinical Pathology 605:10.1007/978-3-642-38922-1_167 492: 442: 370: 1098:Optochin susceptibility test 1061:Sulfide indole motility test 1046:Phenylalanine deaminase test 396:Rehydration and Inoculation: 7: 436:Environmental Microbiology: 280:multi-locus sequence typing 10: 1311: 330: 289: 278:-based methods, including 161:"Analytical profile index" 18: 1207: 1165: 1142:Polymerase chain reaction 1121: 971: 886: 875: 845: 804: 778: 764: 1132:Analytical profile index 689:"API Reference Guide V7" 341:electron transport chain 252:analytical profile index 1290:Microbiology techniques 316:microbiological culture 284:whole-genome sequencing 1066:Triple sugar iron test 430:Clinical Microbiology: 353:Gram-positive bacteria 345:Gram-negative bacteria 247: 1124:point-of-care testing 805:Cultures by body site 758:clinical microbiology 300:Analytab Products Inc 245: 1083:Voges–Proskauer test 991:Bile solubility test 846:Cultures by organism 779:Isolation techniques 480:Database Dependency: 146:improve this article 21:API (disambiguation) 19:For other uses, see 1190:McFarland standards 1180:Disk diffusion test 1175:Beta-lactamase test 1108:Lancefield grouping 1088:X and V factor test 1056:Salt tolerance test 931:Ziehl–Neelsen stain 894:Colonial morphology 646:10.1136/jcp.31.1.22 337:cytochrome coxidase 298:by Pierre Janin of 268:clinically relevant 1295:Taxonomy (biology) 1259:Inoculation needle 349:Enterobacteriaceae 320:enzymatic activity 248: 1267: 1266: 1244:Biosafety cabinet 1203: 1202: 1051:Reverse CAMP test 871: 870: 853:Bacterial culture 614:978-3-642-38921-4 272:phenotypic traits 240: 239: 232: 222: 221: 214: 196: 120: 119: 112: 86:used on Knowledge 84:encyclopedic tone 64: 1302: 1254:Inoculation loop 1152:Rapid strep test 884: 883: 776: 775: 750: 743: 736: 727: 726: 700: 699: 693: 685: 676: 675: 665: 625: 619: 618: 588: 582: 581: 579: 578: 563: 557: 556: 554: 553: 544:. Archived from 538: 532: 527: 521: 520: 518: 517: 503: 461:Standardization: 410:Reading Results: 235: 228: 217: 210: 206: 203: 197: 195: 154: 130: 122: 115: 108: 104: 101: 95: 94:for suggestions. 90:See Knowledge's 75: 74: 67: 56: 34: 33: 26: 1310: 1309: 1305: 1304: 1303: 1301: 1300: 1299: 1270: 1269: 1268: 1263: 1199: 1161: 1117: 1026:Methyl red test 973: 972:Manual testing: 967: 926:India ink stain 916:Acid-fast stain 879: 867: 841: 817:Genital culture 800: 796:Selective media 768: 760: 754: 723: 709: 707:Further reading 704: 703: 691: 687: 686: 679: 626: 622: 615: 597:The Prokaryotes 589: 585: 576: 574: 564: 560: 551: 549: 540: 539: 535: 528: 524: 515: 513: 511:bacdive.dsmz.de 505: 504: 500: 495: 486:Interpretation: 470: 445: 426: 417:Identification: 386: 373: 333: 312: 292: 236: 225: 224: 223: 218: 207: 201: 198: 155: 153: 143: 131: 116: 105: 99: 96: 89: 80:This article's 76: 72: 35: 31: 24: 17: 12: 11: 5: 1308: 1298: 1297: 1292: 1287: 1282: 1265: 1264: 1262: 1261: 1256: 1251: 1246: 1241: 1236: 1235: 1234: 1224: 1223: 1222: 1211: 1209: 1205: 1204: 1201: 1200: 1198: 1197: 1192: 1187: 1182: 1177: 1171: 1169: 1163: 1162: 1160: 1159: 1154: 1149: 1144: 1139: 1134: 1128: 1126: 1122:Automated and 1119: 1118: 1116: 1115: 1110: 1105: 1100: 1095: 1090: 1085: 1080: 1079: 1078: 1068: 1063: 1058: 1053: 1048: 1043: 1038: 1033: 1028: 1023: 1018: 1013: 1008: 1006:Coagulase test 1003: 998: 993: 988: 983: 977: 975: 969: 968: 966: 965: 964: 963: 958: 953: 948: 940: 935: 934: 933: 928: 923: 918: 913: 903: 902: 901: 890: 888: 881: 877:Identification 873: 872: 869: 868: 866: 865: 860: 858:Fungal culture 855: 849: 847: 843: 842: 840: 839: 834: 829: 827:Throat culture 824: 822:Sputum culture 819: 814: 808: 806: 802: 801: 799: 798: 793: 788: 782: 780: 773: 762: 761: 756:Techniques in 753: 752: 745: 738: 730: 721: 720: 715: 708: 705: 702: 701: 677: 620: 613: 583: 572:Microbe Online 558: 533: 522: 497: 496: 494: 491: 490: 489: 483: 477: 474:Limited Scope: 469: 466: 465: 464: 458: 452: 444: 441: 440: 439: 433: 425: 422: 421: 420: 414: 407: 400: 393: 385: 382: 372: 369: 358:Staphylococcus 332: 329: 311: 308: 291: 288: 260:classification 238: 237: 220: 219: 134: 132: 125: 118: 117: 79: 77: 70: 65: 39: 38: 36: 29: 15: 9: 6: 4: 3: 2: 1307: 1296: 1293: 1291: 1288: 1286: 1283: 1281: 1278: 1277: 1275: 1260: 1257: 1255: 1252: 1250: 1247: 1245: 1242: 1240: 1237: 1233: 1230: 1229: 1228: 1227:Anaerobic jar 1225: 1221: 1220:Growth medium 1218: 1217: 1216: 1213: 1212: 1210: 1206: 1196: 1193: 1191: 1188: 1186: 1183: 1181: 1178: 1176: 1173: 1172: 1170: 1168: 1164: 1158: 1157:Monospot test 1155: 1153: 1150: 1148: 1145: 1143: 1140: 1138: 1135: 1133: 1130: 1129: 1127: 1125: 1120: 1114: 1111: 1109: 1106: 1104: 1101: 1099: 1096: 1094: 1091: 1089: 1086: 1084: 1081: 1077: 1074: 1073: 1072: 1069: 1067: 1064: 1062: 1059: 1057: 1054: 1052: 1049: 1047: 1044: 1042: 1039: 1037: 1034: 1032: 1029: 1027: 1024: 1022: 1019: 1017: 1014: 1012: 1009: 1007: 1004: 1002: 999: 997: 994: 992: 989: 987: 984: 982: 979: 978: 976: 970: 962: 959: 957: 954: 952: 949: 947: 944: 943: 941: 939: 936: 932: 929: 927: 924: 922: 919: 917: 914: 912: 909: 908: 907: 904: 900: 897: 896: 895: 892: 891: 889: 885: 882: 878: 874: 864: 863:Viral culture 861: 859: 856: 854: 851: 850: 848: 844: 838: 837:Wound culture 835: 833: 832:Urine culture 830: 828: 825: 823: 820: 818: 815: 813: 812:Blood culture 810: 809: 807: 803: 797: 794: 792: 789: 787: 784: 783: 781: 777: 774: 772: 767: 763: 759: 751: 746: 744: 739: 737: 732: 731: 728: 724: 719: 716: 714: 711: 710: 697: 690: 684: 682: 673: 669: 664: 659: 655: 651: 647: 643: 639: 635: 631: 624: 616: 610: 606: 602: 598: 594: 587: 573: 569: 562: 548:on 2009-05-25 547: 543: 537: 531: 526: 512: 508: 502: 498: 487: 484: 481: 478: 475: 472: 471: 462: 459: 456: 453: 450: 447: 446: 437: 434: 431: 428: 427: 418: 415: 411: 408: 404: 401: 397: 394: 391: 388: 387: 381: 378: 368: 366: 365: 360: 359: 354: 350: 346: 342: 338: 328: 325: 321: 317: 307: 305: 301: 297: 296:United States 287: 285: 281: 277: 273: 269: 265: 261: 257: 253: 244: 234: 231: 216: 213: 205: 202:December 2012 194: 191: 187: 184: 180: 177: 173: 170: 166: 163: â€“  162: 158: 157:Find sources: 151: 147: 141: 140: 135:This article 133: 129: 124: 123: 114: 111: 103: 93: 87: 85: 78: 69: 68: 63: 61: 54: 53: 48: 47: 42: 37: 28: 27: 22: 1131: 1031:Nitrite test 1001:Citrate test 942:Rapid tests 921:Giemsa stain 791:Streak plate 722: 695: 640:(1): 22–30. 637: 633: 623: 596: 586: 575:. Retrieved 571: 561: 550:. Retrieved 546:the original 536: 525: 514:. Retrieved 510: 501: 485: 479: 473: 460: 455:Ease of Use: 454: 448: 435: 429: 424:Applications 416: 409: 402: 395: 390:Test Strips: 389: 384:How It Works 376: 374: 362: 356: 355:, including 334: 313: 293: 276:DNA sequence 255: 251: 249: 226: 208: 199: 189: 182: 175: 168: 156: 144:Please help 139:verification 136: 106: 100:October 2011 97: 81: 57: 50: 44: 43:Please help 40: 1239:Durham tube 1071:Urease test 880:and testing 599:: 225–286. 468:Limitations 403:Incubation: 364:Micrococcus 310:Description 262:system for 1274:Categories 1215:Agar plate 1011:DNAse test 911:Gram stain 696:Biomerieux 577:2024-03-08 552:2009-11-09 516:2024-03-08 493:References 443:Advantages 377:API 20E/NE 371:API 20E/NE 304:bioMĂ©rieux 172:newspapers 46:improve it 1249:Incubator 1208:Equipment 1137:MALDI-TOF 1036:ONPG test 996:CAMP test 899:Hemolysis 766:Isolation 654:0021-9746 413:organism. 361:species, 282:and even 52:talk page 1280:Bacteria 1113:RPR test 1021:KOH test 981:ALA test 951:Catalase 938:Wet prep 906:Staining 264:bacteria 1232:Gas-pak 946:Oxidase 786:Asepsis 771:culture 698:. 2019. 399:tested. 347:family 331:API-20E 290:History 258:, is a 186:scholar 956:Indole 672:342546 670:  663:476713 660:  652:  611:  449:Speed: 406:occur. 188:  181:  174:  167:  159:  1185:Etest 1147:VITEK 1076:rapid 1016:IMViC 692:(PDF) 254:, or 193:JSTOR 179:books 769:and 668:PMID 650:ISSN 609:ISBN 375:The 250:The 165:news 961:PYR 658:PMC 642:doi 601:doi 256:API 148:by 1276:: 694:. 680:^ 666:. 656:. 648:. 638:31 636:. 632:. 607:. 595:. 570:. 509:. 324:pH 274:. 55:. 749:e 742:t 735:v 674:. 644:: 617:. 603:: 580:. 555:. 519:. 233:) 227:( 215:) 209:( 204:) 200:( 190:· 183:· 176:· 169:· 142:. 113:) 107:( 102:) 98:( 88:. 62:) 58:( 23:.

Index

API (disambiguation)
improve it
talk page
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encyclopedic tone
guide to writing better articles
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verification
improve this article
adding citations to reliable sources
"Analytical profile index"
news
newspapers
books
scholar
JSTOR
Learn how and when to remove this message
Learn how and when to remove this message

classification
bacteria
clinically relevant
phenotypic traits
DNA sequence
multi-locus sequence typing
whole-genome sequencing
United States
Analytab Products Inc
bioMĂ©rieux

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